RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 ZNF479Q96JC4 524 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 FAM210BQ96KR6 192 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 OR5B12Q96R08 314 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 PAXXQ9BUH6 204 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 SLC25A2Q9BXI2 301 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 OR51M1Q9H341 326 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 SRD5A3Q9H8P0 318 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 ZNF355PQ9NSJ1 428 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 GAR1Q9NY12 217 aaKnown RBP3.79□□□□□ -1.8
IFT20-205ENST00000578009 MRPL36Q9P0J6 103 aaKnown RBP3.79□□□□□ -1.8
IFT20-205ENST00000578009 MRPL27Q9P0M9 148 aaKnown RBP3.79□□□□□ -1.8
IFT20-205ENST00000578009 KLF12Q9Y4X4 402 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 LRBAP50851 2863 aa3.79□□□□□ -1.8
IFT20-205ENST00000578009 AKAP6Q13023 2319 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 MED13LQ71F56 2210 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 FAM208BQ5VWN6 2430 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 TRBV20OR9-2A0A075B6H5 130 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 IGHV7-81A0A0B4J1V7 117 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 IGHV1-69DA0A0B4J2H0 117 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 IGHV4-61A0A0C4DH41 118 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 WI2-2373I1.2A0A1W2PRP0 233 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 C5orf52A6NGY3 159 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 NCBP2LA6PVI3 153 aaKnown RBP3.78□□□□□ -1.8
IFT20-205ENST00000578009 B4DSR2 109 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 M0QZK8 103 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 EIF3GO75821 320 aaKnown RBP eCLIP3.78□□□□□ -1.8
IFT20-205ENST00000578009 IGHV1-69P01742 117 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 REG1AP05451 166 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 NBEAP1P0C6P0 100 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 RD3LP0DJH9 198 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 PLA2G2AP14555 144 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 MYCNOSP40205 109 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 RPL35P42766 123 aaKnown RBP3.78□□□□□ -1.8
IFT20-205ENST00000578009 RPS10P46783 165 aaKnown RBP3.78□□□□□ -1.8
IFT20-205ENST00000578009 GALR1P47211 349 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 UBE2L3P68036 154 aaKnown RBP3.78□□□□□ -1.8
IFT20-205ENST00000578009 PRB3Q04118 309 aaPredicted RBP3.78□□□□□ -1.8
IFT20-205ENST00000578009 ASPHD1Q5U4P2 390 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 KCNIP4Q6PIL6 250 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 C16orf82Q7Z2V1 217 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 LINC00305Q7Z4B0 112 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 LYPD1Q8N2G4 141 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 ZNF843Q8N446 348 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 OR5AU1Q8NGC0 362 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 SGMS2Q8NHU3 365 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 OCC1Q8TAD7 63 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
IFT20-205ENST00000578009 FXYD5Q96DB9 178 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 RASL11BQ9BPW5 248 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 ELOVL1Q9BW60 279 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 OSTCQ9NRP0 149 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 HIGD1AQ9Y241 93 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 SPENQ96T58 3664 aaKnown RBP3.78□□□□□ -1.8
IFT20-205ENST00000578009 ABCA1O95477 2261 aa3.78□□□□□ -1.8
IFT20-205ENST00000578009 USP9YO00507 2555 aaPredicted RBP3.77□□□□□ -1.81
IFT20-205ENST00000578009 TGIF2-C20orf24A0A0A6YYL0 155 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 TRBV9A0A0B4J1U6 114 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 TRAV5A0A0B4J249 113 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 TRBV6-1A0A0K0K1D8 114 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 MDFIC2A0A1B0GVS7 189 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 GGTLC3B5MD39 225 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 PPP5D1E7EU14 171 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 J3QLI3 93 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 UBE2CO00762 179 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 ISLRO14498 428 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 S100A8P05109 93 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 S100A6P06703 90 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 MSMBP08118 114 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 CXCL1P09341 107 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 HIST1H1EP10412 219 aaKnown RBP3.77□□□□□ -1.81
IFT20-205ENST00000578009 GP9P14770 177 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 COX6B1P14854 86 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 ORM2P19652 201 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 CRYBB3P26998 211 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 GNG4P50150 75 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 CNN1P51911 297 aaKnown RBP3.77□□□□□ -1.81
IFT20-205ENST00000578009 FAM3BP58499 235 aaPredicted RBP3.77□□□□□ -1.81
IFT20-205ENST00000578009 RPL19P84098 196 aaKnown RBP3.77□□□□□ -1.81
IFT20-205ENST00000578009 TIGITQ495A1 244 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 COX19Q49B96 90 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 GFI1BQ5VTD9 330 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 TEX38Q6PEX7 206 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 ZNF329Q86UD4 541 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 LRRC75A-AS1Q8N1F1 130 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 C5orf17Q8NAS9 161 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 OR10G8Q8NGN5 311 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 OR1B1Q8NGR6 318 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 SFRP2Q96HF1 295 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 RBM14Q96PK6 669 aaKnown RBP3.77□□□□□ -1.81
IFT20-205ENST00000578009 SHANK2-AS3Q9BTD1 123 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 DERL1Q9BUN8 251 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 C21orf62Q9NYP8 219 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 EPDR1Q9UM22 224 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 PLXNB1O43157 2135 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 PTPN13Q12923 2485 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 NAV2Q8IVL1 2488 aa3.77□□□□□ -1.81
IFT20-205ENST00000578009 DCHS2Q6V1P9 2916 aa3.76□□□□□ -1.81
IFT20-205ENST00000578009 WNK2Q9Y3S1 2297 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms