RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 OVOL1O14753 267 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 ARL14EPLP0DKL9 152 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 RPL7P18124 248 aaKnown RBP12.59□□□□□ -0.39
ERCC4-208ENST00000576348 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 BPIFA4PQ86YQ2 179 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 MBD3L1Q8WWY6 194 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 GPR82Q96P67 336 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 PAXXQ9BUH6 204 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 RHPN1-AS1Q9BWJ2 59 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 SMPXQ9UHP9 88 aa12.59□□□□□ -0.39
ERCC4-208ENST00000576348 TMEM213A2RRL7 107 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 STAG3L2P0CL84 134 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 STAG3L3P0CL85 134 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 ATF4P18848 351 aaPredicted RBP12.58□□□□□ -0.4
ERCC4-208ENST00000576348 GALR1P47211 349 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 UBE2L3P68036 154 aaKnown RBP12.58□□□□□ -0.4
ERCC4-208ENST00000576348 CLLU1Q5K131 121 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 MORN5Q5VZ52 161 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 IL34Q6ZMJ4 242 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 PQLC2Q6ZP29 291 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 SSX7Q7RTT5 188 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 DYNLRB2Q8TF09 96 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 SLC25A2Q9BXI2 301 aa12.58□□□□□ -0.4
ERCC4-208ENST00000576348 C2orf70A6NJV1 201 aa12.57□□□□□ -0.4
ERCC4-208ENST00000576348 APOHP02749 345 aaPredicted RBP12.57□□□□□ -0.4
ERCC4-208ENST00000576348 NMBP08949 121 aa12.57□□□□□ -0.4
ERCC4-208ENST00000576348 RIPPLY3P57055 190 aa12.57□□□□□ -0.4
ERCC4-208ENST00000576348 RPL11P62913 178 aaKnown RBP12.57□□□□□ -0.4
ERCC4-208ENST00000576348 OR51M1Q9H341 326 aa12.57□□□□□ -0.4
ERCC4-208ENST00000576348 ZFHX3Q15911 3703 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 TRAV1-1A0A0B4J248 108 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 HELTA6NFD8 242 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 ZNF785A8K8V0 405 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 BUB3O43684 328 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 IFNA1P01562 189 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 FOLR2P14207 255 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 CBLN1P23435 193 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 GCHFRP30047 84 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 FAM167A-AS1Q96KT0 104 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 TMEM167BQ9NRX6 74 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 TMEM14CQ9P0S9 112 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 U3KQE9 123 aa12.56□□□□□ -0.4
ERCC4-208ENST00000576348 CHEK1O14757 476 aa12.55□□□□□ -0.4
ERCC4-208ENST00000576348 OR10J4P0C629 311 aa12.55□□□□□ -0.4
ERCC4-208ENST00000576348 PYYP10082 97 aa12.55□□□□□ -0.4
ERCC4-208ENST00000576348 PPT1P50897 306 aa12.55□□□□□ -0.4
ERCC4-208ENST00000576348 C16orf54Q6UWD8 224 aa12.55□□□□□ -0.4
ERCC4-208ENST00000576348 GP9P14770 177 aa12.54□□□□□ -0.4
ERCC4-208ENST00000576348 PSMB3P49720 205 aa12.54□□□□□ -0.4
ERCC4-208ENST00000576348 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
ERCC4-208ENST00000576348 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
ERCC4-208ENST00000576348 BLNKQ8WV28 456 aa12.54□□□□□ -0.4
ERCC4-208ENST00000576348 GNG13Q9P2W3 67 aa12.54□□□□□ -0.4
ERCC4-208ENST00000576348 CUBNO60494 3623 aa12.54□□□□□ -0.4
ERCC4-208ENST00000576348 SAP30O75446 220 aa12.53□□□□□ -0.4
ERCC4-208ENST00000576348 CD5P06127 495 aa12.53□□□□□ -0.4
ERCC4-208ENST00000576348 CSN3P07498 182 aa12.53□□□□□ -0.4
ERCC4-208ENST00000576348 HIST1H1EP10412 219 aaKnown RBP12.53□□□□□ -0.4
ERCC4-208ENST00000576348 EDN2P20800 178 aa12.53□□□□□ -0.4
ERCC4-208ENST00000576348 LINC00482Q8N8I6 264 aa12.53□□□□□ -0.4
ERCC4-208ENST00000576348 GLMPQ8WWB7 406 aa12.53□□□□□ -0.4
ERCC4-208ENST00000576348 TMPRSS5Q9H3S3 457 aa12.53□□□□□ -0.4
ERCC4-208ENST00000576348 SNRPCP09234 159 aaKnown RBP12.52□□□□□ -0.41
ERCC4-208ENST00000576348 MEOX2P50222 304 aa12.52□□□□□ -0.41
ERCC4-208ENST00000576348 CCL20P78556 96 aa12.52□□□□□ -0.41
ERCC4-208ENST00000576348 GUK1Q16774 197 aa12.52□□□□□ -0.41
ERCC4-208ENST00000576348 MANBALQ9NQG1 85 aa12.52□□□□□ -0.41
ERCC4-208ENST00000576348 SELENOKQ9Y6D0 94 aa12.52□□□□□ -0.41
ERCC4-208ENST00000576348 IGKV3-7A0A075B6H7 116 aa12.51□□□□□ -0.41
ERCC4-208ENST00000576348 H3BTX0 84 aa12.51□□□□□ -0.41
ERCC4-208ENST00000576348 NBEAP1P0C6P0 100 aa12.51□□□□□ -0.41
ERCC4-208ENST00000576348 CD33P20138 364 aa12.51□□□□□ -0.41
ERCC4-208ENST00000576348 UBE2G2P60604 165 aa12.51□□□□□ -0.41
ERCC4-208ENST00000576348 RBPMS2Q6ZRY4 209 aaKnown RBP12.51□□□□□ -0.41
ERCC4-208ENST00000576348 FXYD5Q96DB9 178 aa12.51□□□□□ -0.41
ERCC4-208ENST00000576348 ZNF503Q96F45 646 aa12.51□□□□□ -0.41
ERCC4-208ENST00000576348 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
ERCC4-208ENST00000576348 HAGHQ16775 308 aa12.5□□□□□ -0.41
ERCC4-208ENST00000576348 CST9LP1Q5W188 147 aa12.5□□□□□ -0.41
ERCC4-208ENST00000576348 LYPD6BQ8NI32 183 aa12.5□□□□□ -0.41
ERCC4-208ENST00000576348 MLXQ9UH92 298 aa12.5□□□□□ -0.41
ERCC4-208ENST00000576348 H3BQ15 152 aa12.49□□□□□ -0.41
ERCC4-208ENST00000576348 DNASE2O00115 360 aaPredicted RBP12.49□□□□□ -0.41
ERCC4-208ENST00000576348 MRPS12O15235 138 aaKnown RBP12.49□□□□□ -0.41
ERCC4-208ENST00000576348 IGLC2P0DOY2 106 aa12.49□□□□□ -0.41
ERCC4-208ENST00000576348 TAGLN2P37802 199 aaKnown RBP12.49□□□□□ -0.41
ERCC4-208ENST00000576348 MCRIP2Q9BUT9 160 aaKnown RBP12.49□□□□□ -0.41
ERCC4-208ENST00000576348 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
ERCC4-208ENST00000576348 ZNF586Q9NXT0 402 aa12.49□□□□□ -0.41
ERCC4-208ENST00000576348 FBN1P35555 2871 aaKnown RBP12.48□□□□□ -0.41
ERCC4-208ENST00000576348 TRBV19A0A075B6N1 114 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 A0A087X0K7 114 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 PAGE4O60829 102 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 BCL2P10415 239 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 RANP62826 216 aaKnown RBP12.48□□□□□ -0.41
ERCC4-208ENST00000576348 PSG9Q00887 426 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 PDE6HQ13956 83 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 TOR2AQ5JU69 321 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 SAMD13Q5VXD3 122 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 ADAMTSL5Q6ZMM2 481 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms