RNA–Protein interactions for RNA: ENST00000576346.5

NSF-208, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, human

TSL 4

Gene NSF, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSF-208	ENST00000576346	MRPL20	Q9BYC9	149 aa	Known RBP	3.03	□□□□□ -1.92
NSF-208	ENST00000576346	RPP21	Q9H633	154 aa	Known RBP	3.03	□□□□□ -1.92
NSF-208	ENST00000576346	GNB4	Q9HAV0	340 aa		3.03	□□□□□ -1.92
NSF-208	ENST00000576346	ZNF355P	Q9NSJ1	428 aa		3.03	□□□□□ -1.92
NSF-208	ENST00000576346	CBLN4	Q9NTU7	201 aa		3.03	□□□□□ -1.92
NSF-208	ENST00000576346	SERTAD4	Q9NUC0	356 aa		3.03	□□□□□ -1.92
NSF-208	ENST00000576346	C1RL	Q9NZP8	487 aa		3.03	□□□□□ -1.92
NSF-208	ENST00000576346	KAAG1	Q9UBP8	84 aa		3.03	□□□□□ -1.92
NSF-208	ENST00000576346	TACC2	O95359	2948 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PPIAL4E	A0A075B759	164 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	GRIFIN	A4D1Z8	144 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PSMB11	A5LHX3	300 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PGPEP1L	A6NFU8	196 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	HSBP1L1	C9JCN9	74 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PPIAL4D	F5H284	164 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	C16orf97	H3BN30	126 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	BMPR1B	O00238	502 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	NKX2-8	O15522	239 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	HYPM	O75409	117 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	TOMM40	O96008	361 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346		P01737	135 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	IGKV1-16	P04430	117 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	SNRPC	P09234	159 aa	Known RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PPIAL4F	P0DN26	164 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	HNF1A	P20823	631 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	CHRNB4	P30926	498 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	RPL27A	P46776	148 aa	Known RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	REG1B	P48304	166 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	HNRNPA3	P51991	378 aa	Known RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PRRX1	P54821	245 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	CASP6	P55212	293 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	KRTDAP	P60985	99 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	RBPJ	Q06330	500 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	OR5I1	Q13606	314 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PLGLA	Q15195	96 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	DEFB109B	Q30KR1	87 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	SPATA45	Q537H7	98 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PSMG4	Q5JS54	123 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	HIST2H2BC	Q6DN03	193 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	ZNF474	Q6S9Z5	364 aa	Predicted RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	ZNF329	Q86UD4	541 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	DOLPP1	Q86YN1	238 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	LYPD1	Q8N2G4	141 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	ARL6IP6	Q8N6S5	226 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	FAM216B	Q8N7L0	139 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	TMEM116	Q8NCL8	245 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	ST6GALNAC3	Q8NDV1	305 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	OR2D3	Q8NGH3	330 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	VN1R17P	Q8TDU5	208 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	DAZAP1	Q96EP5	407 aa	Known RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	FAM167A-AS1	Q96KT0	104 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	WFIKKN1	Q96NZ8	548 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	CCL13	Q99616	98 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	TXN2	Q99757	166 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	RNASE7	Q9H1E1	156 aa	Known RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	DYNLRB1	Q9NP97	96 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	NRN1	Q9NPD7	142 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	OTOR	Q9NRC9	128 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	TNFRSF19	Q9NS68	423 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	TMEM14C	Q9P0S9	112 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	TP53TG3	Q9ULZ0	132 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	MRPS16	Q9Y3D3	137 aa	Known RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PAM16	Q9Y3D7	125 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	KLF12	Q9Y4X4	402 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PPIAL4A	Q9Y536	164 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	FAM215A	Q9Y5M1	114 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	DIDO1	Q9BTC0	2240 aa	Known RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	ACAN	P16112	2415 aa		3.02	□□□□□ -1.93
NSF-208	ENST00000576346	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	TET2	Q6N021	2002 aa	Predicted RBP	3.02	□□□□□ -1.93
NSF-208	ENST00000576346	YLPM1	P49750	1951 aa	Known RBP	3.01	□□□□□ -1.93
NSF-208	ENST00000576346	HEATR1	Q9H583	2144 aa	Known RBP	3.01	□□□□□ -1.93
NSF-208	ENST00000576346	MAP1A	P78559	2803 aa	Predicted RBP	3.01	□□□□□ -1.93
NSF-208	ENST00000576346	IGKV1OR2-108	A0A075B7D4	117 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	TRAV30	A0A087WSZ9	112 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	TRAV9-2	A0A087WT02	112 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346		A0A1B0GXF2	115 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346		A0A1W2PS18	150 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346		A1L4Q6	167 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	DPRX	A6NFQ7	191 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	SRRM4	A7MD48	611 aa	Known RBP	3.01	□□□□□ -1.93
NSF-208	ENST00000576346	HIGD1C	A8MV81	97 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	TMEM178B	H3BS89	294 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346		M0R2Z0	102 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	CRX	O43186	299 aa	Predicted RBP	3.01	□□□□□ -1.93
NSF-208	ENST00000576346	DLEU1	O43261	78 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	FOXH1	O75593	365 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	LTA	P01374	205 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	IGLV2-8	P01709	118 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	HLA-DRB1	P01911	266 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	TFF1	P04155	84 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	SLC25A5	P05141	298 aa	Known RBP	3.01	□□□□□ -1.93
NSF-208	ENST00000576346	LIPF	P07098	398 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	CRYGC	P07315	174 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	RNF224	P0DH78	156 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	SFTPC	P11686	197 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	MYCNOS	P40205	109 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	CTRL	P40313	264 aa		3.01	□□□□□ -1.93
NSF-208	ENST00000576346	MFAP2	P55001	183 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms