RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 OR1L4Q8NGR5 311 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 OR1L8Q8NGR8 309 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
SCARF1-209ENST00000576012 A0A1W2PNU3 283 aaPredicted RBP11.66□□□□□ -0.54
SCARF1-209ENST00000576012 FNDC10F2Z333 226 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 K7ERJ3 54 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 TIMM23BQ5SRD1 257 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 PET117Q6UWS5 81 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 C17orf77Q96MU5 243 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 C1RLQ9NZP8 487 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 RELNP78509 3460 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 TCRBV4S1A1TA0A5B7 111 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 CRXO43186 299 aaPredicted RBP11.66□□□□□ -0.54
SCARF1-209ENST00000576012 GCSHP23434 173 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 CCL11P51671 97 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 PAX2Q02962 417 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 IGKV1D-37A0A075B6S9 117 aa11.66□□□□□ -0.54
SCARF1-209ENST00000576012 AKAP6Q13023 2319 aa11.65□□□□□ -0.54
SCARF1-209ENST00000576012 IGKV3-15P01624 115 aa11.65□□□□□ -0.54
SCARF1-209ENST00000576012 ATP5L2Q7Z4Y8 100 aa11.65□□□□□ -0.54
SCARF1-209ENST00000576012 ADTRPQ96IZ2 230 aa11.65□□□□□ -0.54
SCARF1-209ENST00000576012 ZNF747Q9BV97 191 aa11.65□□□□□ -0.54
SCARF1-209ENST00000576012 C19orf24Q9BVV8 132 aa11.65□□□□□ -0.54
SCARF1-209ENST00000576012 TCRAP04437 139 aa11.65□□□□□ -0.54
SCARF1-209ENST00000576012 KIR2DL2P43627 348 aaPredicted RBP11.65□□□□□ -0.54
SCARF1-209ENST00000576012 OR10X1Q8NGY0 326 aa11.65□□□□□ -0.54
SCARF1-209ENST00000576012 SPTBN1Q01082 2364 aaKnown RBP11.65□□□□□ -0.54
SCARF1-209ENST00000576012 TMEM186Q96B77 213 aa11.64□□□□□ -0.55
SCARF1-209ENST00000576012 SVEP1Q4LDE5 3571 aa11.64□□□□□ -0.55
SCARF1-209ENST00000576012 TMEM213A2RRL7 107 aa11.64□□□□□ -0.55
SCARF1-209ENST00000576012 ZNF479Q96JC4 524 aa11.64□□□□□ -0.55
SCARF1-209ENST00000576012 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
SCARF1-209ENST00000576012 CSN1S1P47710 185 aa11.64□□□□□ -0.55
SCARF1-209ENST00000576012 FAM162BQ5T6X4 162 aa11.64□□□□□ -0.55
SCARF1-209ENST00000576012 RPUSD1Q9UJJ7 312 aaKnown RBP11.64□□□□□ -0.55
SCARF1-209ENST00000576012 ZZEF1O43149 2961 aa11.64□□□□□ -0.55
SCARF1-209ENST00000576012 D6R8Y8 96 aa11.63□□□□□ -0.55
SCARF1-209ENST00000576012 RBP4P02753 201 aa11.63□□□□□ -0.55
SCARF1-209ENST00000576012 A1L4Q6 167 aa11.63□□□□□ -0.55
SCARF1-209ENST00000576012 M0R3E3 92 aa11.63□□□□□ -0.55
SCARF1-209ENST00000576012 TMEM164Q5U3C3 297 aa11.63□□□□□ -0.55
SCARF1-209ENST00000576012 AMN1Q8IY45 258 aa11.63□□□□□ -0.55
SCARF1-209ENST00000576012 IGFBPL1Q8WX77 278 aa11.63□□□□□ -0.55
SCARF1-209ENST00000576012 AKAP13Q12802 2813 aa11.63□□□□□ -0.55
SCARF1-209ENST00000576012 A0A1B0GUT8 65 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 C9orf118A6NHY6 69 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 ZNF714Q96N38 554 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 A6NDN8 102 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 TEX48A0A1B0GUV7 120 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 G3V4G9 280 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 CNTFRP26992 372 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 LCNL1Q6ZST4 164 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 FAM222BQ8WU58 562 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 MLST8Q9BVC4 326 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 MS4A6AQ9H2W1 248 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 DKK2Q9UBU2 259 aa11.62□□□□□ -0.55
SCARF1-209ENST00000576012 ANKRD11Q6UB99 2663 aaPredicted RBP11.62□□□□□ -0.55
SCARF1-209ENST00000576012 A0A1W2PPI3 338 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 SP9P0CG40 484 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 TNFRSF1AP19438 455 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 TNFAIP6P98066 277 aaPredicted RBP11.61□□□□□ -0.55
SCARF1-209ENST00000576012 JKAMPQ9P055 326 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 APC2O95996 2303 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 ABCA4P78363 2273 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 PPIAL4CA0A0B4J2A2 164 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 PPIAL4GP0DN37 164 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 CGB3P0DN86 165 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 CGB7P0DN87 165 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 WT1P19544 449 aaPredicted RBP11.61□□□□□ -0.55
SCARF1-209ENST00000576012 SAMD13Q5VXD3 122 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 MDS2Q8NDY4 140 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 CACNG8Q8WXS5 425 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 OTOGLQ3ZCN5 2332 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 CLEC3BP05452 202 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 VSTM2AQ8TAG5 236 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 NDFIP1Q9BT67 221 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 PRSS22Q9GZN4 317 aa11.61□□□□□ -0.55
SCARF1-209ENST00000576012 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
SCARF1-209ENST00000576012 K7EP34 96 aa11.6□□□□□ -0.55
SCARF1-209ENST00000576012 FCER1GP30273 86 aa11.6□□□□□ -0.55
SCARF1-209ENST00000576012 SUB1P53999 127 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCARF1-209ENST00000576012 SEC11AP67812 179 aa11.6□□□□□ -0.55
SCARF1-209ENST00000576012 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
SCARF1-209ENST00000576012 NKX2-8O15522 239 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 LTAP01374 205 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 FCGR2BP31994 310 aaPredicted RBP11.59□□□□□ -0.55
SCARF1-209ENST00000576012 SLC25A48Q6ZT89 311 aaKnown RBP11.59□□□□□ -0.55
SCARF1-209ENST00000576012 Q86TA4 180 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 RPRMLQ8N4K4 120 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 RNF7Q9UBF6 113 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 ZGRF1Q86YA3 2104 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 IGHV3OR16-8A0A075B7F1 116 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 FSTL3O95633 263 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 UFSP1Q6NVU6 142 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 C8orf49Q96NF6 230 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 GAFA1Q96PS6 74 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 SIGLEC8Q9NYZ4 499 aa11.59□□□□□ -0.55
SCARF1-209ENST00000576012 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms