RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	CARD19	Q96LW7	228 aa		4.07	□□□□□ -1.76
TOM1L1-222	ENST00000575909	GPX7	Q96SL4	187 aa	Predicted RBP	4.07	□□□□□ -1.76
TOM1L1-222	ENST00000575909	AGPAT4-IT1	Q9H0P7	198 aa		4.07	□□□□□ -1.76
TOM1L1-222	ENST00000575909	FAM60A	Q9NP50	221 aa		4.07	□□□□□ -1.76
TOM1L1-222	ENST00000575909	CKLF	Q9UBR5	152 aa		4.07	□□□□□ -1.76
TOM1L1-222	ENST00000575909	PTPN23	Q9H3S7	1636 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	TOPBP1	Q92547	1522 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909		A0A096LNJ9	63 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	IGHV5-51	A0A0C4DH38	117 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909		A0A0G2JND7	137 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	C11orf94	C9JXX5	98 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	C8orf87	E5RJ46	101 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	LGALS9	O00182	355 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	CST7	O76096	145 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SLC25A6	P12236	298 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	POLR2I	P36954	125 aa	Known RBP	4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	P2RX1	P51575	399 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	KRTAP10-3	P60369	221 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	RPS23	P62266	143 aa	Known RBP	4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	BVES-AS1	Q5T3Y7	98 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	LINC00305	Q7Z4B0	112 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	DEFB107A	Q8IZN7	70 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	DRAM1	Q8N682	238 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ZNF709	Q8N972	641 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	RPP21	Q9H633	154 aa	Known RBP	4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	OTOR	Q9NRC9	128 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	C21orf62	Q9NYP8	219 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	LINC00527	Q9UJ94	153 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SPCS1	Q9Y6A9	102 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	TSPOAP1	O95153	1857 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	NUP210L	Q5VU65	1888 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	KIF13A	Q9H1H9	1805 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	CC2D2A	Q9P2K1	1620 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	UGGT1	Q9NYU2	1555 aa		4.06	□□□□□ -1.76
TOM1L1-222	ENST00000575909	EHBP1L1	Q8N3D4	1523 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ARHGEF12	Q9NZN5	1544 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	PXDNL	A1KZ92	1463 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ADGRL1	O94910	1474 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ADAMTS13	Q76LX8	1427 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ITSN1	Q15811	1721 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	FAM236A	A0A1B0GUQ0	79 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	FAM236B	A0A1B0GV22	79 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909		A0A1W2PPM0	123 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SLC25A14	O95258	325 aa	Predicted RBP	4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	MT-ATP8	P03928	68 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SLC25A5	P05141	298 aa	Known RBP	4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	HLA-DMB	P28068	263 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	TAS2R45	P59539	299 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	PRR3	P79522	188 aa	Known RBP	4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	DIAPH2-AS1	Q14236	149 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	PSMG4	Q5JS54	123 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	VN1R4	Q7Z5H5	301 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SIGLECL1	Q8N7X8	197 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	C15orf53	Q8NAA6	179 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	LRRC29	Q8WV35	223 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	CCL17	Q92583	94 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	TM2D3	Q9BRN9	247 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SLC35B3	Q9H1N7	401 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	RBM12B-AS1	Q9P1G2	102 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SERP1	Q9Y6X1	66 aa		4.05	□□□□□ -1.76
TOM1L1-222	ENST00000575909	PPL	O60437	1756 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SHANK3	Q9BYB0	1731 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	TRAV9-1	A0A075B6T8	112 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ZNF727	A8MUV8	499 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	C17orf112	F2Z3M2	114 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	PGLYRP1	O75594	196 aa	Predicted RBP	4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	RBP4	P02753	201 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	GFER	P55789	205 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	EBI3	Q14213	229 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	CDK5R1	Q15078	307 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	KTN1-AS1	Q86SY8	53 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SAXO1	Q8IYX7	474 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	RNF182	Q8N6D2	247 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	C18orf32	Q8TCD1	76 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	LMX1A	Q8TE12	382 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	PPDPFL	Q8WWR9	84 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	RBMXL1	Q96E39	390 aa	Known RBP	4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	HES2	Q9Y543	173 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ABCC6	O95255	1503 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	KIAA0586	Q9BVV6	1533 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SCN1A	P35498	2009 aa		4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	EDC4	Q6P2E9	1401 aa	Known RBP	4.04	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ADGB	Q8N7X0	1667 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ATRX	P46100	2492 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	HECW1	Q76N89	1606 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ITGB4	P16144	1822 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	TRBV20-1	A0A075B6N2	111 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	TRAV8-3	A0A0A6YYJ7	113 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	HLA-DRB4	P13762	266 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	LGALS3	P17931	250 aa	Known RBP	4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	PNOC	Q13519	176 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	LGALS9B	Q3B8N2	356 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	FAM222A	Q5U5X8	452 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ATP5L2	Q7Z4Y8	100 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	LINC00471	Q8N535	108 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ZIC4	Q8N9L1	334 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	KLK6	Q92876	244 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	SLC39A9	Q9NUM3	307 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms