RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 RAB11AP62491 216 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 RHOBP62745 196 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 OR2F1Q13607 317 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 MEF2DQ14814 521 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 ESRGQ1W209 222 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 RNASE12Q5GAN4 147 aaKnown RBP6.22□□□□□ -1.41
SMG6-218ENST00000575454 GPR107Q5VW38 600 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 NFE4Q86UQ8 179 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 CCDC28AQ8IWP9 274 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 BAP18Q8IXM2 172 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 TMEM229BQ8NBD8 167 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 LHFPL5Q8TAF8 219 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 MARCH1Q8TCQ1 289 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 TMEM263Q8WUH6 116 aaKnown RBP6.22□□□□□ -1.41
SMG6-218ENST00000575454 UHRF2Q96PU4 802 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 TMEM147Q9BVK8 224 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 SLC25A32Q9H2D1 315 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 SLC25A22Q9H936 323 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 ZNF586Q9NXT0 402 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 TRAV12-2A0A075B6T6 113 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 A0A0J9YY99 117 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 CRYM-AS1A6NIL9 109 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 FAM25AB3EWG3 89 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 FAM25CB3EWG5 89 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 FAM25GB3EWG6 89 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 J3QL48 77 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 ZNF701M0R085 212 aaPredicted RBP6.21□□□□□ -1.42
SMG6-218ENST00000575454 RAB3DO95716 219 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 AKR1C4P17516 323 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 TGFBR1P36897 503 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 LSM3P62310 102 aaKnown RBP6.21□□□□□ -1.42
SMG6-218ENST00000575454 SMCO1Q147U7 214 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 STEAP1BQ6NZ63 245 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 MZT2AQ6P582 158 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 S100A7AQ86SG5 101 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 ZNF738Q8NE65 137 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 BPIFCQ8NFQ6 507 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 OR52I2Q8NH67 350 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 AP3S1Q92572 193 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 C18orf15Q96N68 181 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 C20orf144Q9BQM9 153 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 RTBDNQ9BSG5 229 aaPredicted RBP6.21□□□□□ -1.42
SMG6-218ENST00000575454 VCX3AQ9NNX9 186 aa6.21□□□□□ -1.42
SMG6-218ENST00000575454 TRAV8-2A0A0B4J237 113 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 A0A0B4J2A0 478 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 DISC1C4P0D8 188 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 HPGDSO60760 199 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 RLN2P04090 185 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 ORM2P19652 201 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 CDKN1BP46527 198 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 RPP30P78346 268 aaKnown RBP6.2□□□□□ -1.42
SMG6-218ENST00000575454 HIST1H1AQ02539 215 aaPredicted RBP6.2□□□□□ -1.42
SMG6-218ENST00000575454 SSBP1Q04837 148 aaKnown RBP6.2□□□□□ -1.42
SMG6-218ENST00000575454 FGL1Q08830 312 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 ICAM4Q14773 271 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 THAP8Q8NA92 274 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 OR8A1Q8NGG7 326 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 OR4D10Q8NGI6 311 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 OR1S1Q8NH92 325 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 LRRC20Q8TCA0 184 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 RNASE8Q8TDE3 154 aaKnown RBP6.2□□□□□ -1.42
SMG6-218ENST00000575454 SLC25A39Q9BZJ4 359 aaPredicted RBP6.2□□□□□ -1.42
SMG6-218ENST00000575454 RBKSQ9H477 322 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 SHPKQ9UHJ6 478 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 RNF24Q9Y225 148 aa6.2□□□□□ -1.42
SMG6-218ENST00000575454 TRAV9-2A0A087WT02 112 aa6.19□□□□□ -1.42
SMG6-218ENST00000575454 SIVA1O15304 175 aa6.19□□□□□ -1.42
SMG6-218ENST00000575454 ANXA3P12429 323 aa6.19□□□□□ -1.42
SMG6-218ENST00000575454 RPL7P18124 248 aaKnown RBP6.19□□□□□ -1.42
SMG6-218ENST00000575454 SRPXP78539 464 aa6.19□□□□□ -1.42
SMG6-218ENST00000575454 MRPS10P82664 201 aaKnown RBP6.19□□□□□ -1.42
SMG6-218ENST00000575454 Q6ZRN7 208 aaPredicted RBP6.19□□□□□ -1.42
SMG6-218ENST00000575454 RNF182Q8N6D2 247 aa6.19□□□□□ -1.42
SMG6-218ENST00000575454 YIPF6Q96EC8 236 aa6.19□□□□□ -1.42
SMG6-218ENST00000575454 C17orf77Q96MU5 243 aa6.19□□□□□ -1.42
SMG6-218ENST00000575454 SCGB3A2Q96PL1 93 aa6.19□□□□□ -1.42
SMG6-218ENST00000575454 GAGE12BA1L429 117 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 SNURFLB1AK76 121 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 K7EP13 123 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 GAGE7O76087 117 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 GAGE12FP0CL80 117 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 GAGE12GP0CL81 117 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 GAGE12IP0CL82 117 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 HOXA5P20719 270 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 RAP2BP61225 183 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 PSG3Q16557 428 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 IGFL4Q6B9Z1 124 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 Q6ZSN1 163 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 CIB3Q96Q77 187 aaPredicted RBP6.18□□□□□ -1.42
SMG6-218ENST00000575454 PRRT1Q99946 306 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 PAIP2BQ9ULR5 123 aaKnown RBP6.18□□□□□ -1.42
SMG6-218ENST00000575454 GPR132Q9UNW8 380 aa6.18□□□□□ -1.42
SMG6-218ENST00000575454 IGKV1OR2-108A0A075B7D4 117 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 MED6O75586 246 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 CXCL3P19876 107 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 GCSHP23434 173 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 KRTAP10-1P60331 282 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 DAZ2Q13117 558 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms