RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 DIRC3C9JPN6 131 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 NPFFO15130 113 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 GOSR1O95249 250 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 GCGP01275 180 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 ADMP35318 185 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 TPPP2P59282 170 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 LCN12Q6JVE5 192 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 PIP4P2Q8N4L2 257 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 C1RLQ9NZP8 487 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 POLR3KQ9Y2Y1 108 aaPredicted RBP8.26□□□□□ -1.09
USP43-205ENST00000574408 LY96Q9Y6Y9 160 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 H3BTX0 84 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 SNAI2O43623 268 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 PLP1P60201 277 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 CLEC2AQ6UVW9 174 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 C10orf105Q8TEF2 133 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 BBC3Q96PG8 261 aaPredicted RBP8.25□□□□□ -1.09
USP43-205ENST00000574408 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 NPIPB5A8MRT5 1133 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 ZNF329Q86UD4 541 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 Q8N9W7 124 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 LINC00479Q96M42 142 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 MCRIP2Q9BUT9 160 aaKnown RBP8.25□□□□□ -1.09
USP43-205ENST00000574408 IGHV7-81A0A0B4J1V7 117 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 CENPVL3A0A0U1RRI6 287 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 NBEAP1P0C6P0 100 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 TPPP3Q9BW30 176 aa8.25□□□□□ -1.09
USP43-205ENST00000574408 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP43-205ENST00000574408 IGLV11-55A0A075B6I3 123 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 TMEM183BQ1AE95 376 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 NEU1Q99519 415 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 MRPL18Q9H0U6 180 aaKnown RBP8.24□□□□□ -1.09
USP43-205ENST00000574408 ZNF586Q9NXT0 402 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 CSMD1Q96PZ7 3565 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 PEX7O00628 323 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 GNG7O60262 68 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 GP9P14770 177 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 GNG5P63218 68 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 TTC9CQ8N5M4 171 aa8.24□□□□□ -1.09
USP43-205ENST00000574408 SLC25A39Q9BZJ4 359 aaPredicted RBP8.24□□□□□ -1.09
USP43-205ENST00000574408 IGHV4-30-2A0A087WSY4 118 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 OR2J3O76001 311 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 SLC25A5P05141 298 aaKnown RBP8.23□□□□□ -1.09
USP43-205ENST00000574408 FOXL1Q12952 345 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 SPATA45Q537H7 98 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 NRGNQ92686 78 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 MAP1AP78559 2803 aaPredicted RBP8.23□□□□□ -1.09
USP43-205ENST00000574408 PGPA6NDG6 321 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 HLA-DRB1P01911 266 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 PAX8Q06710 450 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 RNASEKQ6P5S7 137 aaKnown RBP8.23□□□□□ -1.09
USP43-205ENST00000574408 UNQ5815/PRO19632Q6UWF5 114 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 OR4C5Q8NGB2 326 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 IGF2BP2-AS1Q96M15 143 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 RNASE7Q9H1E1 156 aaKnown RBP8.23□□□□□ -1.09
USP43-205ENST00000574408 PPP1R14DQ9NXH3 145 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 CDC42EP3Q9UKI2 254 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 SH2D7A6NKC9 451 aaPredicted RBP8.23□□□□□ -1.09
USP43-205ENST00000574408 DLEU1O43261 78 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 IGHV3-23P01764 117 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 TYMSP04818 313 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 IL4P05112 153 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 CSN3P07498 182 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 EGR2P11161 476 aaPredicted RBP8.23□□□□□ -1.09
USP43-205ENST00000574408 MFAP4P55083 255 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 ECSCRQ19T08 205 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 OR5R1Q8NH85 324 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 TMUB1Q9BVT8 246 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 USP9YO00507 2555 aaPredicted RBP8.23□□□□□ -1.09
USP43-205ENST00000574408 DOPEY2Q9Y3R5 2298 aa8.23□□□□□ -1.09
USP43-205ENST00000574408 TRAV40A0A0B4J280 105 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 NDUFS8O00217 210 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 HSBP1O75506 76 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 NDUFB8O95169 186 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 IGLV2-8P01709 118 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 MYCNOSP40205 109 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 BRD3OSQ6XYD6 125 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 RNF125Q96EQ8 232 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 C21orf62Q9NYP8 219 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 IL36BQ9NZH7 164 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 THYN1Q9P016 225 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 POLQO75417 2590 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 TOMM40O96008 361 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 MRPL27Q9P0M9 148 aaKnown RBP8.22□□□□□ -1.09
USP43-205ENST00000574408 EPDR1Q9UM22 224 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 CSPG4Q6UVK1 2322 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 VWC2LB2RUY7 222 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 ISLRO14498 428 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 ZNF491Q8N8L2 437 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 ZC2HC1AQ96GY0 325 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 V9GYV3 84 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 PTPN13Q12923 2485 aa8.22□□□□□ -1.09
USP43-205ENST00000574408 TRAV30A0A087WSZ9 112 aa8.21□□□□□ -1.09
USP43-205ENST00000574408 RAB4AP20338 218 aa8.21□□□□□ -1.09
USP43-205ENST00000574408 SRIP30626 198 aa8.21□□□□□ -1.09
USP43-205ENST00000574408 COTL1Q14019 142 aa8.21□□□□□ -1.09
USP43-205ENST00000574408 PMCHL1Q16048 86 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms