RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 OR11H12B2RN74 326 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 IER3P46695 156 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 TEPPQ6URK8 271 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 OR11H1Q8NG94 326 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 OR11H2Q8NH07 326 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 TSSC4Q9Y5U2 329 aaPredicted RBP12.8□□□□□ -0.36
USP43-204ENST00000573955 INSIG2Q9Y5U4 225 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 ZFHX3Q15911 3703 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 TRAV9-1A0A075B6T8 112 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 TMEM8BA6NDV4 472 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 ZNF207O43670 478 aaKnown RBP12.8□□□□□ -0.36
USP43-204ENST00000573955 IGLV1-47P01700 117 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 USF1P22415 310 aaPredicted RBP12.8□□□□□ -0.36
USP43-204ENST00000573955 ZNF137PP52743 207 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 SLC25A34Q6PIV7 304 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 OR1L8Q8NGR8 309 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 NDUFA4L2Q9NRX3 87 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 HIF1ANQ9NWT6 349 aa12.8□□□□□ -0.36
USP43-204ENST00000573955 BUB1B-PAK6H3BSN5 160 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 PAGE4O60829 102 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 MPDU1O75352 247 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 LINC00869P0C866 280 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 OPRK1P41145 380 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 KLRD1Q13241 179 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 TMEM249Q2WGJ8 235 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 BLNKQ8WV28 456 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 FAM110AQ9BQ89 295 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 LSM4Q9Y4Z0 139 aaKnown RBP12.79□□□□□ -0.36
USP43-204ENST00000573955 CGB1A6NKQ9 187 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
USP43-204ENST00000573955 STPG3Q8N7X2 389 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 TMEM167AQ8TBQ9 72 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 RPEQ96AT9 228 aa12.79□□□□□ -0.36
USP43-204ENST00000573955 ABCA12Q86UK0 2595 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 IGHV1-3A0A0C4DH29 117 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 WT1-ASQ06250 92 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 VMA21Q3ZAQ7 101 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 MRPL54Q6P161 138 aaKnown RBP12.78□□□□□ -0.36
USP43-204ENST00000573955 VSTM2AQ8TAG5 236 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 NEU4Q8WWR8 484 aaPredicted RBP12.78□□□□□ -0.36
USP43-204ENST00000573955 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 TEX48A0A1B0GUV7 120 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 GNB1P62873 340 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 SPATA31B1PQ5VZV4 182 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 OR2K2Q8NGT1 345 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 DPF1Q92782 380 aa12.78□□□□□ -0.36
USP43-204ENST00000573955 SSBP3Q9BWW4 388 aaPredicted RBP12.78□□□□□ -0.36
USP43-204ENST00000573955 IGKV1OR2-108A0A075B7D4 117 aa12.77□□□□□ -0.36
USP43-204ENST00000573955 TRBV9A0A0B4J1U6 114 aa12.77□□□□□ -0.36
USP43-204ENST00000573955 ACTL6BO94805 426 aa12.77□□□□□ -0.36
USP43-204ENST00000573955 DTX2Q86UW9 622 aa12.77□□□□□ -0.36
USP43-204ENST00000573955 OR5A1Q8NGJ0 315 aa12.77□□□□□ -0.36
USP43-204ENST00000573955 TSKUQ8WUA8 353 aa12.77□□□□□ -0.36
USP43-204ENST00000573955 HILPDAQ9Y5L2 63 aa12.77□□□□□ -0.36
USP43-204ENST00000573955 ERHP84090 104 aaKnown RBP12.77□□□□□ -0.37
USP43-204ENST00000573955 OR2T6Q8NHC8 308 aa12.77□□□□□ -0.37
USP43-204ENST00000573955 A0A1B0GW15 77 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 PSMB11A5LHX3 300 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 ARL14EPLP0DKL9 152 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 CD24P25063 80 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 TNXAQ16473 311 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 OR10G8Q8NGN5 311 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 C9orf118A6NHY6 69 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 H0Y8G0 127 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 HIST1H1AQ02539 215 aaPredicted RBP12.76□□□□□ -0.37
USP43-204ENST00000573955 C8orf46Q8TAG6 207 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 NAT8BQ9UHF3 227 aa12.76□□□□□ -0.37
USP43-204ENST00000573955 FSTL3O95633 263 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 NPPCP23582 126 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 MRGPRG-AS1Q2M3A8 158 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 HCP5Q6MZN7 132 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 PERPQ96FX8 193 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 GNB1LQ9BYB4 327 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 IL36BQ9NZH7 164 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 A0A1W2PPI3 338 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 C11orf94C9JXX5 98 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 J3QR89 54 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 UBE2G1P62253 170 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 LY6G5BQ8NDX9 201 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 PSG8Q9UQ74 426 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 ARL2-SNX15V9GYD0 113 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 H3BUT2 72 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 BRI3O95415 125 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 ATP5G3P48201 142 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 LGALS4P56470 323 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 SEC11AP67812 179 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 SSBP2P81877 361 aaPredicted RBP12.75□□□□□ -0.37
USP43-204ENST00000573955 JMJD8Q96S16 334 aa12.75□□□□□ -0.37
USP43-204ENST00000573955 PGPEP1LA6NFU8 196 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 FOXH1O75593 365 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 FBXL15Q9H469 300 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 FBN2P35556 2912 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 UBR5O95071 2799 aaPredicted RBP12.74□□□□□ -0.37
USP43-204ENST00000573955 A0A087X0K7 114 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 TIMM23O14925 209 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 MT-ND6P03923 174 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms