RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	TMEM213	A2RRL7	107 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	RGS13	O14921	159 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	NPPC	P23582	126 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	RAB2A	P61019	212 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	CD300E	Q496F6	205 aa	Predicted RBP	10.83	□□□□□ -0.68
ABR-223	ENST00000573895	PATE2	Q6UY27	113 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	RPP25L	Q8N5L8	163 aa	Known RBP	10.83	□□□□□ -0.68
ABR-223	ENST00000573895	DYNLRB2	Q8TF09	96 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	TMEM37	Q8WXS4	190 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	ZNF414	Q96IQ9	312 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	METTL26	Q96S19	204 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	PBDC1	Q9BVG4	233 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	VSIR	Q9H7M9	311 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	ZFAND3	Q9H8U3	227 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	C19orf73	Q9NVV2	129 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	UFC1	Q9Y3C8	167 aa		10.83	□□□□□ -0.68
ABR-223	ENST00000573895	NBEAL2	Q6ZNJ1	2754 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	ZNF320	A2RRD8	509 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	IZUMO1R	A6ND01	250 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.82	□□□□□ -0.68
ABR-223	ENST00000573895	TEX46	H3BTG2	121 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	C8orf88	P0DMB2	117 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	IGHV4-30-4	P0DP06	118 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	TAS2R45	P59539	299 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	USF2	Q15853	346 aa	Predicted RBP	10.82	□□□□□ -0.68
ABR-223	ENST00000573895	GCSAML	Q5JQS6	135 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	FAM74A1	Q5RGS3	127 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	FAM78B	Q5VT40	261 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	SBSPON	Q8IVN8	264 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	FAM213B	Q8TBF2	198 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	MBD3L1	Q8WWY6	194 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	TMEM190	Q8WZ59	177 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	NARS2	Q96I59	477 aa	Known RBP	10.82	□□□□□ -0.68
ABR-223	ENST00000573895	WWC2-AS2	Q96NR7	200 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	FUT9	Q9Y231	359 aa		10.82	□□□□□ -0.68
ABR-223	ENST00000573895	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.82	□□□□□ -0.68
ABR-223	ENST00000573895	CTXND1	A0A1B0GTU2	59 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	ZNF785	A8K8V0	405 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	CRYBB3	P26998	211 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	CDC34	P49427	236 aa	Predicted RBP	10.81	□□□□□ -0.68
ABR-223	ENST00000573895	C1orf194	Q5T5A4	169 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	FAM122C	Q6P4D5	195 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	LINC00305	Q7Z4B0	112 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	STXBP6	Q8NFX7	210 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	RAB24	Q969Q5	203 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	ASCL2	Q99929	193 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	SHANK2-AS3	Q9BTD1	123 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	C20orf24	Q9BUV8	137 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.81	□□□□□ -0.68
ABR-223	ENST00000573895	DOK5	Q9P104	306 aa		10.81	□□□□□ -0.68
ABR-223	ENST00000573895	TRAV1-1	A0A0B4J248	108 aa		10.8	□□□□□ -0.68
ABR-223	ENST00000573895	TRAV25	A0A0B4J276	109 aa		10.8	□□□□□ -0.68
ABR-223	ENST00000573895		A0A1W2PS18	150 aa		10.8	□□□□□ -0.68
ABR-223	ENST00000573895	HBE1	P02100	147 aa		10.8	□□□□□ -0.68
ABR-223	ENST00000573895	H2AFB1	P0C5Y9	115 aa		10.8	□□□□□ -0.68
ABR-223	ENST00000573895	BMI1	P35226	326 aa		10.8	□□□□□ -0.68
ABR-223	ENST00000573895	UNQ9165/PRO28630	Q6UXU0	137 aa		10.8	□□□□□ -0.68
ABR-223	ENST00000573895	SEPSECS	Q9HD40	501 aa	Known RBP	10.8	□□□□□ -0.68
ABR-223	ENST00000573895	DAZ1	Q9NQZ3	744 aa	Known RBP	10.8	□□□□□ -0.68
ABR-223	ENST00000573895		U3KQE9	123 aa		10.8	□□□□□ -0.68
ABR-223	ENST00000573895	FHIT	P49789	147 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	TM4SF20	Q53R12	229 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	KHDC3L	Q587J8	217 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	CLLU1	Q5K131	121 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	SFT2D1	Q8WV19	159 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	GRAMD2B	Q96HH9	432 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	GPR82	Q96P67	336 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	TMEM231	Q9H6L2	316 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	ZMAT4	Q9H898	229 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	MLX	Q9UH92	298 aa		10.79	□□□□□ -0.68
ABR-223	ENST00000573895	ZNF98	A6NK75	572 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895		H3BRN7	92 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	CXorf1	O96002	111 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	STAG3L2	P0CL84	134 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	STAG3L3	P0CL85	134 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	EDN2	P20800	178 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	ZNF726P1	Q15940	193 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	PQLC2	Q6ZP29	291 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	MIR17HG	Q75NE6	70 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	LYPD6B	Q8NI32	183 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	UHRF2	Q96PU4	802 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	TM2D3	Q9BRN9	247 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	SMPX	Q9UHP9	88 aa		10.78	□□□□□ -0.68
ABR-223	ENST00000573895	DNAH7	Q8WXX0	4024 aa		10.77	□□□□□ -0.68
ABR-223	ENST00000573895	IGHV7-4-1	A0A0J9YVY3	117 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	MAP1LC3B2	A6NCE7	125 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	BUB3	O43684	328 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	NMB	P08949	121 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	CD81	P60033	236 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	TMEM61	Q8N0U2	210 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	MAP1LC3B	Q9GZQ8	125 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	TUBA4B	Q9H853	241 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	SLC25A22	Q9H936	323 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	TMEM14C	Q9P0S9	112 aa		10.77	□□□□□ -0.69
ABR-223	ENST00000573895	IGHV3OR16-8	A0A075B7F1	116 aa		10.76	□□□□□ -0.69
ABR-223	ENST00000573895	CD5	P06127	495 aa		10.76	□□□□□ -0.69
ABR-223	ENST00000573895	RPL7	P18124	248 aa	Known RBP	10.76	□□□□□ -0.69
ABR-223	ENST00000573895	PPT1	P50897	306 aa		10.76	□□□□□ -0.69
ABR-223	ENST00000573895	PMS2P11	Q13670	270 aa		10.76	□□□□□ -0.69
ABR-223	ENST00000573895	GUCA2B	Q16661	112 aa		10.76	□□□□□ -0.69

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