RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 TMEM141Q96I45 108 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 JMJD8Q96S16 334 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 PRTN3P24158 256 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 TEX43Q6ZNM6 134 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 GAGE2BQ13066 116 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 ZNF672Q499Z4 452 aaPredicted RBP10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 GAGE2EQ4V326 116 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 TMEM86BQ8N661 226 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 GAGE2DQ9UEU5 116 aa10.08□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGHV1-24A0A0C4DH33 117 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 ZFAND6Q6FIF0 208 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 THAP8Q8NA92 274 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 TRBV7-9A0A0J9YWB2 115 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 NDUFS8O00217 210 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 SLC25A20O43772 301 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 PAX2Q02962 417 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 LY6EQ16553 131 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 RASL10AQ92737 203 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 SCRT1Q9BWW7 348 aa10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 BEX4Q9NWD9 120 aaPredicted RBP10.07□□□□□ -0.8
PCDHGA9-201ENST00000573521 Q0VFX4 171 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 ANAPC13Q9BS18 74 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 M0R2P5 195 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 SNAI2O43623 268 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 FOXG1P55316 489 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 DTX2Q86UW9 622 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 V9GYV3 84 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 SCN5AQ14524 2016 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 NPIPB5A8MRT5 1133 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 VMO1Q7Z5L0 202 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 C7orf69Q9H7B7 122 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 CACNA1DQ01668 2161 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 K7EM74 188 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 CD28P10747 220 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 TEX36Q5VZQ5 186 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 LCN12Q6JVE5 192 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 LINC01587Q99440 93 aa10.06□□□□□ -0.8
PCDHGA9-201ENST00000573521 C5orf63A6NC05 138 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 RHODO00212 210 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 KIR3DS1Q14943 382 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 IL17RELQ6ZVW7 336 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 OR11H6Q8NGC7 330 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 KLHDC3Q9BQ90 382 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 KLF5Q13887 457 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 Q8N8P6 123 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 RSPO3Q9BXY4 272 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 TRAV3A0A0B4J244 114 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 SHISA9B4DS77 424 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 C15orf32Q32M92 178 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 DMRTA2Q96SC8 542 aa10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 FAM110DQ8TAY7 271 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA9-201ENST00000573521 GATA3P23771 443 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 ZNF415Q09FC8 603 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGFL3Q6UXB1 125 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGLV1-44P01699 117 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 COX8AP10176 69 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 SSBP2P81877 361 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 F8W1H4 67 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 PRR20EP86478 221 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 PRR20CP86479 221 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 PRR20DP86480 221 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 PRR20BP86481 221 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 PRR20AP86496 221 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 RNF144BQ7Z419 303 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 CHAC1Q9BUX1 264 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 SNHG12Q9BXW3 62 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 SPTA1P02549 2419 aa10.04□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGHV3-35A0A0C4DH35 117 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 ZC2HC1BQ5TFG8 222 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 LINC01545Q5VT33 79 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 SVILO95425 2214 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 TRBV19A0A075B6N1 114 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 C9orf118A6NHY6 69 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 TDGF1P13385 188 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 ZNF726P1Q15940 193 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 LYPD6Q86Y78 171 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 MRPL53Q96EL3 112 aaKnown RBP10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 KAAG1Q9UBP8 84 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 GGTLC3B5MD39 225 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 EXOC3-AS1Q8N2X6 119 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 HTTP42858 3142 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 LILRA1O75019 489 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGKV1-39P01597 117 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGKV1D-39P04432 117 aa10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 LGALS1P09382 135 aaKnown RBP10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 SRSF6Q13247 344 aaKnown RBP10.03□□□□□ -0.8
PCDHGA9-201ENST00000573521 KIR2DL5BA0A0G2JN68 375 aa10.02□□□□□ -0.8
PCDHGA9-201ENST00000573521 KIR2DL5BA0A0G2JPC4 375 aa10.02□□□□□ -0.8
PCDHGA9-201ENST00000573521 KIR2DL5AQ8N109 375 aa10.02□□□□□ -0.8
PCDHGA9-201ENST00000573521 TMEM105Q8N8V8 129 aa10.02□□□□□ -0.8
PCDHGA9-201ENST00000573521 DNAJC30Q96LL9 226 aa10.02□□□□□ -0.8
PCDHGA9-201ENST00000573521 IGLV3-9A0A075B6K5 115 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms