RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 Q6ZPA2 131 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 DDB2Q92466 427 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 RITA1Q96K30 269 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 CFAP46Q8IYW2 2715 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 SPTBN5Q9NRC6 3674 aaKnown RBP8.04□□□□□ -1.12
SMG6-213ENST00000573166 ZNF253O75346 499 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 PYYP10082 97 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 NDPQ00604 133 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 PLA2G2EQ9NZK7 142 aa8.04□□□□□ -1.12
SMG6-213ENST00000573166 YTHDF2Q9Y5A9 579 aaKnown RBP8.04□□□□□ -1.12
SMG6-213ENST00000573166 LOC102723971A0A1B0GUV8 181 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 PTTG1IPP53801 180 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 ODF3L1Q8IXM7 274 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 MGST2Q99735 147 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 CD5P06127 495 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 GPX1P07203 203 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 TMEM116Q8NCL8 245 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 TNFRSF13BO14836 293 aaPredicted RBP8.03□□□□□ -1.12
SMG6-213ENST00000573166 NUTF2P61970 127 aaKnown RBP8.03□□□□□ -1.12
SMG6-213ENST00000573166 SRSF4Q08170 494 aaKnown RBP8.03□□□□□ -1.12
SMG6-213ENST00000573166 Q8N9W7 124 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 C5orf17Q8NAS9 161 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 OR2D3Q8NGH3 330 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 VN1R17PQ8TDU5 208 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 PRDM13Q9H4Q3 707 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 LINC00574Q9H8X3 128 aa8.03□□□□□ -1.12
SMG6-213ENST00000573166 IGHV7-81A0A0B4J1V7 117 aa8.02□□□□□ -1.12
SMG6-213ENST00000573166 TSPOP30536 169 aa8.02□□□□□ -1.12
SMG6-213ENST00000573166 MFAP2P55001 183 aa8.02□□□□□ -1.12
SMG6-213ENST00000573166 TCF24Q7RTU0 167 aa8.02□□□□□ -1.12
SMG6-213ENST00000573166 GPR82Q96P67 336 aa8.02□□□□□ -1.12
SMG6-213ENST00000573166 TRAV5A0A0B4J249 113 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 ELANEP08246 267 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 CAMPP49913 170 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 FAM3BP58499 235 aaPredicted RBP8.02□□□□□ -1.13
SMG6-213ENST00000573166 ST6GALNAC6Q969X2 333 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 SCRT1Q9BWW7 348 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 NPIPB5A8MRT5 1133 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 J3QR89 54 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 CD5LO43866 347 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 PAX9P55771 341 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 RNASEKQ6P5S7 137 aaKnown RBP8.02□□□□□ -1.13
SMG6-213ENST00000573166 FA2HQ7L5A8 372 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 NHLRC2Q8NBF2 726 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 TRAV34A0A0B4J273 112 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 INAFM1C9JVW0 142 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 C5orf30Q96GV9 206 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 SLC25A39Q9BZJ4 359 aaPredicted RBP8.02□□□□□ -1.13
SMG6-213ENST00000573166 VSIRQ9H7M9 311 aa8.02□□□□□ -1.13
SMG6-213ENST00000573166 OR4C46A6NHA9 309 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 PROP1O75360 226 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 CD33P20138 364 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 FCER1GP30273 86 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 SIGLEC15Q6ZMC9 328 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 NPBQ8NG41 125 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 OR1N2Q8NGR9 330 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 IGLC7A0M8Q6 106 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 PMS2P5A8MQ11 134 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 SAMD13Q5VXD3 122 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 Q9H3A6 140 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 DAZ1Q9NQZ3 744 aaKnown RBP8.01□□□□□ -1.13
SMG6-213ENST00000573166 C5orf52A6NGY3 159 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 CXCL1P09341 107 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 C5orf56Q8N8D9 126 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 OR11H1Q8NG94 326 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 HSPB9Q9BQS6 159 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 SLC50A1Q9BRV3 221 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 RHPN1-AS1Q9BWJ2 59 aa8.01□□□□□ -1.13
SMG6-213ENST00000573166 SEPSECSQ9HD40 501 aaKnown RBP8.01□□□□□ -1.13
SMG6-213ENST00000573166 ODF3BA8MYP8 253 aa8□□□□□ -1.13
SMG6-213ENST00000573166 RPP25LQ8N5L8 163 aaKnown RBP8□□□□□ -1.13
SMG6-213ENST00000573166 TOMM40O96008 361 aa8□□□□□ -1.13
SMG6-213ENST00000573166 TRGC1P0CF51 173 aa8□□□□□ -1.13
SMG6-213ENST00000573166 ATP5G3P48201 142 aa8□□□□□ -1.13
SMG6-213ENST00000573166 SPATA31B1PQ5VZV4 182 aa8□□□□□ -1.13
SMG6-213ENST00000573166 DYNAPQ8N1N2 210 aa8□□□□□ -1.13
SMG6-213ENST00000573166 GLMPQ8WWB7 406 aa8□□□□□ -1.13
SMG6-213ENST00000573166 A0A1B0GV90 55 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 FNDC10F2Z333 226 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 IGLV2-14P01704 120 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 ZNF688P0C7X2 276 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 CDX1P47902 265 aaPredicted RBP7.99□□□□□ -1.13
SMG6-213ENST00000573166 SPANXN1Q5VSR9 72 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 Q6ZN92 141 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 TTC9CQ8N5M4 171 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 FRYLO94915 3013 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 TMEM189A5PLL7 270 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 SNURFLB1AK76 121 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 LINC01619G3V211 115 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 SAPCD1Q5SSQ6 148 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 MBD6Q96DN6 1003 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 PARLQ9H300 379 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 TMEM250H0YL14 139 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 LY6G6DO95868 133 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 PRB4P10163 310 aaPredicted RBP7.99□□□□□ -1.13
SMG6-213ENST00000573166 LYL1P12980 280 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 ELOBQ15370 118 aa7.99□□□□□ -1.13
SMG6-213ENST00000573166 LBHQ53QV2 105 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms