RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 A8MWL6 223 aa8.89□□□□□ -0.99
RPAIN-212ENST00000573126 K7EIM0 57 aa8.89□□□□□ -0.99
RPAIN-212ENST00000573126 MAJINQ3KP22 176 aa8.89□□□□□ -0.99
RPAIN-212ENST00000573126 ATP5L2Q7Z4Y8 100 aa8.89□□□□□ -0.99
RPAIN-212ENST00000573126 SMIM12Q96EX1 92 aa8.89□□□□□ -0.99
RPAIN-212ENST00000573126 M0R2Z0 102 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 COL8A1P27658 744 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 HTR1DP28221 377 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 HES1Q14469 280 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 PMCHL1Q16048 86 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 Q86TA4 180 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 CACNA1BQ00975 2339 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 OR2J3O76001 311 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 CTRLP40313 264 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 PAX2Q02962 417 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 OTORQ9NRC9 128 aa8.88□□□□□ -0.99
RPAIN-212ENST00000573126 SH2D7A6NKC9 451 aaPredicted RBP8.87□□□□□ -0.99
RPAIN-212ENST00000573126 IGLV2-11P01706 119 aa8.87□□□□□ -0.99
RPAIN-212ENST00000573126 IL4P05112 153 aa8.87□□□□□ -0.99
RPAIN-212ENST00000573126 BCL6BQ8N143 479 aaPredicted RBP8.87□□□□□ -0.99
RPAIN-212ENST00000573126 RBM14Q96PK6 669 aaKnown RBP8.87□□□□□ -0.99
RPAIN-212ENST00000573126 DPM3Q9P2X0 92 aa8.87□□□□□ -0.99
RPAIN-212ENST00000573126 AKAP6Q13023 2319 aa8.87□□□□□ -0.99
RPAIN-212ENST00000573126 FAM181BA6NEQ2 426 aa8.87□□□□□ -0.99
RPAIN-212ENST00000573126 NBR2O15453 112 aa8.87□□□□□ -0.99
RPAIN-212ENST00000573126 Q56UQ5 140 aa8.87□□□□□ -0.99
RPAIN-212ENST00000573126 EBLN2Q6P2I7 272 aa8.87□□□□□ -0.99
RPAIN-212ENST00000573126 KLF5Q13887 457 aaPredicted RBP8.86□□□□□ -0.99
RPAIN-212ENST00000573126 RBPMS2Q6ZRY4 209 aaKnown RBP8.86□□□□□ -0.99
RPAIN-212ENST00000573126 LY6G5BQ8NDX9 201 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 URB1-AS1Q96HZ7 61 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 TMEM14CQ9P0S9 112 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 CT83Q5H943 113 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 BPIFA4PQ86YQ2 179 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 CFHR4Q92496 578 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 RNF5Q99942 180 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 SHANK2-AS3Q9BTD1 123 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 CLEC5AQ9NY25 188 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 ZNF492Q9P255 531 aa8.86□□□□□ -0.99
RPAIN-212ENST00000573126 TRBV19A0A075B6N1 114 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 M0QZK8 103 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 M0R3E3 92 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 RPLP1P05386 114 aaKnown RBP8.85□□□□□ -0.99
RPAIN-212ENST00000573126 ZNF25P17030 456 aaPredicted RBP8.85□□□□□ -0.99
RPAIN-212ENST00000573126 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 OR4F17Q8NGA8 305 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 RNF125Q96EQ8 232 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 TXN2Q99757 166 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 RAB1BQ9H0U4 201 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 IGLC2P0DOY2 106 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 IGLC3P0DOY3 106 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 FCGR2BP31994 310 aaPredicted RBP8.85□□□□□ -0.99
RPAIN-212ENST00000573126 FBXL19-AS1Q494R0 122 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 ZC2HC1AQ96GY0 325 aa8.85□□□□□ -0.99
RPAIN-212ENST00000573126 ZNF785A8K8V0 405 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 TFPI2P48307 235 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 SIGLEC15Q6ZMC9 328 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 Q6ZN92 141 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 OR11H6Q8NGC7 330 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 TIMD4Q96H15 378 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 NCBP2LA6PVI3 153 aaKnown RBP8.84□□□□□ -0.99
RPAIN-212ENST00000573126 NPIPB6E9PJ23 425 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 H3BRN7 92 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 CHEK1O14757 476 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 GNG7O60262 68 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 HLA-DRB1P01911 266 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 ADORA2A-AS1P86434 159 aa8.84□□□□□ -0.99
RPAIN-212ENST00000573126 LOC105371242A0A075B767 164 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 C2orf70A6NJV1 201 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 IGHV3-23P01764 117 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 BTF3P20290 206 aaKnown RBP8.83□□□□□ -1
RPAIN-212ENST00000573126 ZNF138P52744 262 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 NDPQ00604 133 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 C5orf64Q2M2E5 130 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 SPATA12Q7Z6I5 190 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 SRSF8Q9BRL6 282 aaKnown RBP8.83□□□□□ -1
RPAIN-212ENST00000573126 TPPP3Q9BW30 176 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 GFRA4Q9GZZ7 299 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 UQCR10Q9UDW1 63 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 RAXQ9Y2V3 346 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 HOXB4P17483 251 aaPredicted RBP8.83□□□□□ -1
RPAIN-212ENST00000573126 CEACAM3P40198 252 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 DYNAPQ8N1N2 210 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 FANCD2OSQ96PS1 177 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 SPTBN4Q9H254 2564 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 SOX21Q9Y651 276 aaPredicted RBP8.83□□□□□ -1
RPAIN-212ENST00000573126 CHD8Q9HCK8 2581 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 NCOR2Q9Y618 2525 aa8.83□□□□□ -1
RPAIN-212ENST00000573126 NDUFA3O95167 84 aa8.82□□□□□ -1
RPAIN-212ENST00000573126 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
RPAIN-212ENST00000573126 LPAR2Q9HBW0 351 aa8.82□□□□□ -1
RPAIN-212ENST00000573126 APOHP02749 345 aaPredicted RBP8.82□□□□□ -1
RPAIN-212ENST00000573126 ARMS2P0C7Q2 107 aa8.82□□□□□ -1
RPAIN-212ENST00000573126 PRTN3P24158 256 aa8.82□□□□□ -1
RPAIN-212ENST00000573126 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
RPAIN-212ENST00000573126 MRPL52Q86TS9 123 aaKnown RBP8.82□□□□□ -1
RPAIN-212ENST00000573126 NPBQ8NG41 125 aa8.82□□□□□ -1
RPAIN-212ENST00000573126 ZNF414Q96IQ9 312 aa8.82□□□□□ -1
RPAIN-212ENST00000573126 TMEM208Q9BTX3 173 aa8.82□□□□□ -1
RPAIN-212ENST00000573126 IGHV3OR16-8A0A075B7F1 116 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms