RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 J3KRW8 73 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 LYRM1O43325 122 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 CFDP00746 253 aaPredicted RBP5.42□□□□□ -1.54
NUP88-205ENST00000572809 SPP1P10451 314 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 NUP62P37198 522 aaPredicted RBP5.42□□□□□ -1.54
NUP88-205ENST00000572809 LYZP61626 148 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 TMEM41BQ5BJD5 291 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 C1orf194Q5T5A4 169 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 OR4D5Q8NGN0 318 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 PPP1R14BQ96C90 147 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 SMIM8Q96KF7 97 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 MGAT4CQ9UBM8 478 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 FBXL17Q9UF56 701 aa5.42□□□□□ -1.54
NUP88-205ENST00000572809 NUPR2A6NF83 97 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 H3BP45 60 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 TCRBP04435 133 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 GIG44P09565 113 aaPredicted RBP5.41□□□□□ -1.54
NUP88-205ENST00000572809 GATA2P23769 480 aaPredicted RBP5.41□□□□□ -1.54
NUP88-205ENST00000572809 ID1P41134 155 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 PAX9P55771 341 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 NUTF2P61970 127 aaKnown RBP5.41□□□□□ -1.54
NUP88-205ENST00000572809 VAMP2P63027 116 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 AKR1C1Q04828 323 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 IAH1Q2TAA2 248 aaPredicted RBP5.41□□□□□ -1.54
NUP88-205ENST00000572809 CEMP1Q6PRD7 247 aaPredicted RBP5.41□□□□□ -1.54
NUP88-205ENST00000572809 TMEM144Q7Z5S9 345 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 OR8I2Q8N0Y5 310 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 BPIFCQ8NFQ6 507 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 C11orf45Q8TAV5 145 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 MITD1Q8WV92 249 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 GSKIPQ9P0R6 139 aa5.41□□□□□ -1.54
NUP88-205ENST00000572809 KLK5Q9Y337 293 aaPredicted RBP5.41□□□□□ -1.54
NUP88-205ENST00000572809 TRAV6A0A075B6T7 132 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 SMCO3A2RU48 225 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 PMS2P5A8MQ11 134 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 H3BMM0 161 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 DEFB4AO15263 64 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 SSSCA1O60232 199 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 ORM2P19652 201 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 S100A7P31151 101 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 TMEM182Q6ZP80 229 aaPredicted RBP5.4□□□□□ -1.54
NUP88-205ENST00000572809 LINC00299Q6ZSB3 139 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 ZBTB8BQ8NAP8 495 aaPredicted RBP5.4□□□□□ -1.54
NUP88-205ENST00000572809 CSNK1G2-AS1Q8NCQ2 148 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 PHLDA1Q8WV24 401 aaPredicted RBP5.4□□□□□ -1.54
NUP88-205ENST00000572809 LINC00052Q96N35 136 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 CCDC32Q9BV29 185 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 MFFQ9GZY8 342 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 C20orf85Q9H1P6 137 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 C11orf68Q9H3H3 251 aaKnown RBP5.4□□□□□ -1.54
NUP88-205ENST00000572809 NPVFQ9HCQ7 196 aa5.4□□□□□ -1.54
NUP88-205ENST00000572809 AGRNO00468 2067 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 ZNF98A6NK75 572 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 ZNF705EA8MWA4 302 aaPredicted RBP5.39□□□□□ -1.55
NUP88-205ENST00000572809 CCNKO75909 580 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 MBPP02686 304 aaPredicted RBP5.39□□□□□ -1.55
NUP88-205ENST00000572809 IL5P05113 134 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 METTL15P1P0C7V9 234 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 MIFP14174 115 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 C4BPBP20851 252 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 GALR1P47211 349 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 TAS2R30P59541 319 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 NANOS2P60321 138 aaKnown RBP5.39□□□□□ -1.55
NUP88-205ENST00000572809 RRAS2P62070 204 aaPredicted RBP5.39□□□□□ -1.55
NUP88-205ENST00000572809 DLK1P80370 383 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 ZNF846Q147U1 533 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 DGAT2L7PQ6IED9 249 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 TMEM14EPQ6UXP3 125 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 CYP2G1PQ6ZSU1 146 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 ACOT7LQ6ZUV0 252 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 OR10P1Q8NGE3 313 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 OR1B1Q8NGR6 318 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 ZNF431Q8TF32 576 aaPredicted RBP5.39□□□□□ -1.55
NUP88-205ENST00000572809 S100ZQ8WXG8 99 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 RSG1Q9BU20 258 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 TMEM147Q9BVK8 224 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 C1QTNF4Q9BXJ3 329 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 SAV1Q9H4B6 383 aaPredicted RBP5.39□□□□□ -1.55
NUP88-205ENST00000572809 SLC25A22Q9H936 323 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 CLEC5AQ9NY25 188 aa5.39□□□□□ -1.55
NUP88-205ENST00000572809 DYNC2H1Q8NCM8 4307 aaKnown RBP5.38□□□□□ -1.55
NUP88-205ENST00000572809 IGHV4-28A0A0C4DH34 117 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 FAM240BA0A1B0GVZ2 78 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 C7orf66A4D0T2 115 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 C5orf51A6NDU8 294 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 FAM25EA8MYX2 175 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 FNDC10F2Z333 226 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 L7N2F9 121 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 ISLRO14498 428 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 SOCS3O14543 225 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 CCSO14618 274 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 TSC22D2O75157 780 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 LY6G6CO95867 125 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 IGKV3-20P01619 116 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 RBMY1A1P0DJD3 496 aaKnown RBP5.38□□□□□ -1.55
NUP88-205ENST00000572809 RBMY1CP0DJD4 496 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 HLA-DRB4P13762 266 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 PCP4P48539 62 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 PSMB3P49720 205 aa5.38□□□□□ -1.55
NUP88-205ENST00000572809 MEOX2P50222 304 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms