RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FAM216BQ8N7L0 139 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 Q8N9W7 124 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 OR5AK2Q8NH90 309 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 PFN4Q8NHR9 129 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 LINC01560Q8TB33 94 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 PSMF1Q92530 271 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 LINC00479Q96M42 142 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 PKMYT1Q99640 499 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 BET1LQ9NYM9 111 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 NISCHQ9Y2I1 1504 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 RTEL1-TNFRSF6BF6WH68 1400 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 CRB1P82279 1406 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 ECM29Q5VYK3 1845 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 CHD1O14646 1710 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 AHDC1Q5TGY3 1603 aaPredicted RBP3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 IGKV3D-20A0A0C4DH25 116 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 KLF18A0A0U1RQI7 1052 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 M0R2P5 195 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 LECT2O14960 151 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 OR1I1O60431 355 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 HYPMO75409 117 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 TRGV3P03979 118 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 KISS1Q15726 138 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 OR2T2Q6IF00 324 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 PATE2Q6UY27 113 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 SMCR5Q8TEV8 140 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 ATG5Q9H1Y0 275 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 TMEM106BQ9NUM4 274 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 RPL26L1Q9UNX3 145 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 ABCC3O15438 1527 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 SCN2AQ99250 2005 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 ADGRB1O14514 1584 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 GON4LQ3T8J9 2241 aa3.42□□□□□ -1.86
TOPBP1-210ENST00000572787 DOCK7Q96N67 2140 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 ARHGAP5Q13017 1502 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 DSCAML1Q8TD84 2053 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 LOC107986453A0A1B0GWG9 222 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 H3BMM0 161 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 SDCBPO00560 298 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 LY6HO94772 140 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 CD3DP04234 171 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 MSMBP08118 114 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 GIG44P09565 113 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 IL7P13232 177 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 NFYAP23511 347 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 PCBD1P61457 104 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 BLCAPP62952 87 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 CDK5R1Q15078 307 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 KHDC3LQ587J8 217 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 OR5AS1Q8N127 324 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 Q8N2B8 174 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 POM121L12Q8N7R1 296 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 C3orf56Q8N813 242 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 RHOXF1Q8NHV9 184 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 UBE2WQ96B02 151 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 SDF2L1Q9HCN8 221 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 BCL2L10Q9HD36 194 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 TAS2R4Q9NYW5 299 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 ZNF638Q14966 1978 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 RIMBP3CA6NJZ7 1639 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 RIMBP3BA6NNM3 1639 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 RIMBP3Q9UFD9 1639 aa3.41□□□□□ -1.86
TOPBP1-210ENST00000572787 TICRRQ7Z2Z1 1910 aa3.4□□□□□ -1.86
TOPBP1-210ENST00000572787 IGKV6D-41A0A0C4DH26 115 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 C7orf66A4D0T2 115 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 FAM24AA6NFZ4 105 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 H7C423 109 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 GYPBP06028 91 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 SAA1P0DJI8 122 aaPredicted RBP3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 SLC25A4P12235 298 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 CCL4P13236 92 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 FABP4P15090 132 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 DYNLT1P63172 113 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 UBE2SQ16763 222 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 IQCJQ1A5X6 159 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 ASB16-AS1Q495Z4 193 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 FAM74A1Q5RGS3 127 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNF660Q6AZW8 331 aaPredicted RBP3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 SDIM1Q6ZPB5 146 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 MIR7-3HGQ8N6C7 128 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 FGF13Q92913 245 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 MRPS24Q96EL2 167 aaKnown RBP3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNF222Q9UK12 451 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 LINC00312Q9Y6C7 94 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 MAST2Q6P0Q8 1798 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 N4BP2Q86UW6 1770 aaPredicted RBP3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 MAGI2Q86UL8 1455 aa3.4□□□□□ -1.87
TOPBP1-210ENST00000572787 CHD4Q14839 1912 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 UACAQ9BZF9 1416 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 IGHV3-73A0A0B4J1V6 119 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 CYSRT1A8MQ03 144 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 OOSP1A8MZH6 123 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNF736B4DX44 427 aaPredicted RBP3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 PITX3O75364 302 aa3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 ZNF705BP0CI00 300 aaPredicted RBP3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 FUSP35637 526 aaKnown RBP eCLIP3.39□□□□□ -1.87
TOPBP1-210ENST00000572787 NPC2P61916 151 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms