RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-205ENST00000572621 OVOL1O14753 267 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 MBNL3Q9NUK0 354 aaKnown RBP11.36□□□□□ -0.59
PRPF8-205ENST00000572621 TANC2Q9HCD6 1990 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 MALRD1Q5VYJ5 2156 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 TEX43Q6ZNM6 134 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 LHFPL1Q86WI0 220 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 Q8TAT8 98 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 A0A1B0GW64 132 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 EPOPA6NHQ4 379 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 INS-IGF2F8WCM5 200 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 INSP01308 110 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 FREM1Q5H8C1 2179 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 ASCL4Q6XD76 172 aa11.36□□□□□ -0.59
PRPF8-205ENST00000572621 ABHD17AQ96GS6 310 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 CITED1Q99966 193 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 RCHY1Q96PM5 261 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 PRSS22Q9GZN4 317 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 CSTL1Q9H114 145 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 SBF2Q86WG5 1849 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 GAGE2AQ6NT46 116 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 MRPS18CQ9Y3D5 142 aaKnown RBP11.35□□□□□ -0.59
PRPF8-205ENST00000572621 COL24A1Q17RW2 1714 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 CDK2AP2O75956 126 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 SELLP14151 372 aa11.35□□□□□ -0.59
PRPF8-205ENST00000572621 STPG4Q8N801 248 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 RSPO3Q9BXY4 272 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-205ENST00000572621 TRAV3A0A0B4J244 114 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 VCYO14598 125 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 DTX2Q86UW9 622 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 AMN1Q8IY45 258 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 C14orf178Q8N769 122 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-205ENST00000572621 FOXF2Q12947 444 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 SH2D1AO60880 128 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 GAS1P54826 345 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 NDPQ00604 133 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 C6orf226Q5I0X4 101 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 NMSQ5H8A3 153 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
PRPF8-205ENST00000572621 C1orf159Q96HA4 380 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 SPXQ9BT56 116 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 NTF4P34130 210 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 C5orf24Q7Z6I8 188 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 RPUSD1Q9UJJ7 312 aaKnown RBP11.33□□□□□ -0.6
PRPF8-205ENST00000572621 MED12LQ86YW9 2145 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 LEPROTO15243 131 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 NEUROG3Q9Y4Z2 214 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 CD5LO43866 347 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 IGKV1-5P01602 117 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 MRPL27Q9P0M9 148 aaKnown RBP11.33□□□□□ -0.6
PRPF8-205ENST00000572621 TRPM7Q96QT4 1865 aa11.33□□□□□ -0.6
PRPF8-205ENST00000572621 TRAV40A0A0B4J280 105 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 LYPD3O95274 346 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 LTBRP36941 435 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 COL4A1P02462 1669 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 PSPNO60542 156 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 IGHV3-53P01767 116 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 CHAC1Q9BUX1 264 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.32□□□□□ -0.6
PRPF8-205ENST00000572621 A8MWP6 167 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 DNAJC30Q96LL9 226 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 KLF12Q9Y4X4 402 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 SPG11Q96JI7 2443 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 TRGV1A0A0A0MS02 117 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 C9orf153Q5TBE3 101 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 TRGV9Q99603 122 aa11.32□□□□□ -0.6
PRPF8-205ENST00000572621 FCN3O75636 299 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 TMEM14EPQ6UXP3 125 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
PRPF8-205ENST00000572621 EREGO14944 169 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 WNT2P09544 360 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 RPL36AP83881 106 aaKnown RBP11.31□□□□□ -0.6
PRPF8-205ENST00000572621 RPL36ALQ969Q0 106 aaKnown RBP11.31□□□□□ -0.6
PRPF8-205ENST00000572621 LINC00479Q96M42 142 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 COL5A3P25940 1745 aaPredicted RBP11.31□□□□□ -0.6
PRPF8-205ENST00000572621 TRAV13-1A0A0B4J241 112 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 WDR81Q562E7 1941 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 IGHV2-26A0A0B4J1V2 119 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 SRSF7Q16629 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRPF8-205ENST00000572621 PRIMA1Q86XR5 153 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 RASL10AQ92737 203 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 LINC00205P59089 165 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 RNASE6Q93091 150 aaKnown RBP11.31□□□□□ -0.6
PRPF8-205ENST00000572621 IGHV1-46P01743 117 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 IGFL4Q6B9Z1 124 aa11.31□□□□□ -0.6
PRPF8-205ENST00000572621 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 A0A1B0GWJ7 208 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 TMEM200BQ69YZ2 307 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 ERCC8Q13216 396 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 MRPL14Q6P1L8 145 aaKnown RBP11.3□□□□□ -0.6
PRPF8-205ENST00000572621 SPRR3Q9UBC9 169 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 RLFQ13129 1914 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 PRR14LQ5THK1 2151 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 TIMM21Q9BVV7 248 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 TRAV41A0A0B4J266 112 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 ADCYAP1P18509 176 aa11.3□□□□□ -0.6
PRPF8-205ENST00000572621 SBF1O95248 1867 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms