RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 SMPXQ9UHP9 88 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 ARL2-SNX15V9GYD0 113 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 A0A1W2PRX2 142 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 RAB19A4D1S5 217 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 LINC00862A6NCI5 91 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 NDUFS6O75380 124 aaKnown RBP9.11□□□□□ -0.95
CDRT1-206ENST00000571263 ARL14EPLP0DKL9 152 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 HIST1H1EP10412 219 aaKnown RBP9.11□□□□□ -0.95
CDRT1-206ENST00000571263 GCHFRP30047 84 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 KRTAP10-3P60369 221 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 C16orf54Q6UWD8 224 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 SHISA2Q6UWI4 295 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 C18orf65Q6ZTR6 163 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 OR9G4Q8NGQ1 327 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 SCRT1Q9BWW7 348 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 SLC25A2Q9BXI2 301 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 CLEC5AQ9NY25 188 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 SIGLEC8Q9NYZ4 499 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 ZFHX3Q15911 3703 aa9.11□□□□□ -0.95
CDRT1-206ENST00000571263 TRAV5A0A0B4J249 113 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 ADARB2-AS1A8MUL3 147 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 NBEAP1P0C6P0 100 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 PDE6HQ13956 83 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 DEFB136Q30KP8 78 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 NSUN5P1Q3KNT7 163 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 TM4SF20Q53R12 229 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 SPATA31B1PQ5VZV4 182 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 SSX7Q7RTT5 188 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 IQCF2Q8IXL9 164 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 LYPD1Q8N2G4 141 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 C3orf56Q8N813 242 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 RHPN1-AS1Q9BWJ2 59 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 MTORP42345 2549 aa9.1□□□□□ -0.95
CDRT1-206ENST00000571263 A0A1W2PRE2 83 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 OVOL1O14753 267 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 CHEK1O14757 476 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 HMGB3O15347 200 aaKnown RBP9.09□□□□□ -0.95
CDRT1-206ENST00000571263 ZNF253O75346 499 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 PF4P02776 101 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 ATF4P18848 351 aaPredicted RBP9.09□□□□□ -0.95
CDRT1-206ENST00000571263 CBLN1P23435 193 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 SLURP1P55000 103 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 FGF8P55075 233 aaPredicted RBP9.09□□□□□ -0.95
CDRT1-206ENST00000571263 UBE2L3P68036 154 aaKnown RBP9.09□□□□□ -0.95
CDRT1-206ENST00000571263 PSG9Q00887 426 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 PEA15Q15121 130 aa9.09□□□□□ -0.95
CDRT1-206ENST00000571263 DLX4Q92988 240 aaPredicted RBP9.09□□□□□ -0.95
CDRT1-206ENST00000571263 IGHV3OR16-8A0A075B7F1 116 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 A0A087X0K7 114 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 TMEM213A2RRL7 107 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 RBFOX3A6NFN3 312 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 C2orf70A6NJV1 201 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 ZNF785A8K8V0 405 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 FOLR2P14207 255 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 GP9P14770 177 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 MORN5Q5VZ52 161 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 UQCC3Q6UW78 93 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 SIGLEC15Q6ZMC9 328 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 EIF4E3Q8N5X7 224 aaKnown RBP9.08□□□□□ -0.96
CDRT1-206ENST00000571263 PCNPQ8WW12 178 aaKnown RBP9.08□□□□□ -0.96
CDRT1-206ENST00000571263 GLMPQ8WWB7 406 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 FXYD5Q96DB9 178 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 TCEAL7Q9BRU2 100 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 VAX2Q9UIW0 290 aa9.08□□□□□ -0.96
CDRT1-206ENST00000571263 TRAV25A0A0B4J276 109 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 MRPS12O15235 138 aaKnown RBP9.07□□□□□ -0.96
CDRT1-206ENST00000571263 ZNF207O43670 478 aaKnown RBP9.07□□□□□ -0.96
CDRT1-206ENST00000571263 IGLC2P0DOY2 106 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 PAFAH1B2P68402 229 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 CCL20P78556 96 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 LEMD1Q68G75 181 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 ZNF503Q96F45 646 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 SLC50A1Q9BRV3 221 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 EIF5A2Q9GZV4 153 aaKnown RBP9.07□□□□□ -0.96
CDRT1-206ENST00000571263 GNG13Q9P2W3 67 aa9.07□□□□□ -0.96
CDRT1-206ENST00000571263 TRBV19A0A075B6N1 114 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 A0A1B0GV50 99 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 APOHP02749 345 aaPredicted RBP9.06□□□□□ -0.96
CDRT1-206ENST00000571263 CSN3P07498 182 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 OR10J4P0C629 311 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 PYYP10082 97 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 BCL2P10415 239 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 MEF2BQ02080 365 aaPredicted RBP9.06□□□□□ -0.96
CDRT1-206ENST00000571263 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 OR2K2Q8NGT1 345 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 DUX3Q96PT4 197 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 MCRIP2Q9BUT9 160 aaKnown RBP9.06□□□□□ -0.96
CDRT1-206ENST00000571263 TMPRSS5Q9H3S3 457 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
CDRT1-206ENST00000571263 TRAV2A0A0B4J234 112 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 LOC102723971A0A1B0GUV8 181 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 F6UZH7 168 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 PDE6DO43924 150 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 PAGE4O60829 102 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 INSL3P51460 131 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 CST9LP1Q5W188 147 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 TCF24Q7RTU0 167 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 COMMD7Q86VX2 200 aa9.05□□□□□ -0.96
CDRT1-206ENST00000571263 RXFP4Q8TDU9 374 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms