RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CNPY1Q3B7I2 92 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 AARDQ4LEZ3 155 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 DEFB121Q5J5C9 76 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 C10orf55Q5SWW7 151 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 ZNF57Q68EA5 555 aaPredicted RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 SLC25A24Q6NUK1 477 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 LINC00299Q6ZSB3 139 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 SLC35G3Q8N808 338 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 GDPD1Q8N9F7 314 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 ZNF680Q8NEM1 530 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 OR4C16Q8NGL9 310 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 OR9G4Q8NGQ1 327 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 OR6Q1Q8NGQ2 317 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 MARCH1Q8TCQ1 289 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 VN1R17PQ8TDU5 208 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 CASTOR1Q8WTX7 329 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 DCUN1D4Q92564 292 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 DLX4Q92988 240 aaPredicted RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 RBPMSQ93062 196 aaKnown RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 EEF1AKMT3Q96AZ1 226 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 SEC22AQ96IW7 307 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 ATP6V0BQ99437 205 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 SLC25A21Q9BQT8 299 aaPredicted RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 RTBDNQ9BSG5 229 aaPredicted RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 PAXXQ9BUH6 204 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 FXYD6Q9H0Q3 95 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 TMEM222Q9H0R3 208 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 PALMDQ9NP74 551 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 ENY2Q9NPA8 101 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 NDUFA4L2Q9NRX3 87 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 TMEM14BQ9NUH8 114 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 SLC2A8Q9NY64 477 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 MGAM2Q2M2H8 2515 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 IGLV11-55A0A075B6I3 123 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 TRAV3A0A0B4J244 114 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 IGLC7A0M8Q6 106 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 ZNF320A2RRD8 509 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 CRYM-AS1A6NIL9 109 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 LGALS9O00182 355 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 OR2J3O76001 311 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 CDS2O95674 445 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 PRH1P02810 166 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 AKR1C4P17516 323 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 UCP1P25874 307 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 ATP5IP56385 69 aaPredicted RBP2.8□□□□□ -1.96
NUP88-202ENST00000570937 SYNJ2BPP57105 145 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 SPCS3P61009 180 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 PRCDQ00LT1 54 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 COTL1Q14019 142 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 KLK9Q2XQG4 91 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 SP6Q3SY56 376 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 TMEM128Q5BJH2 165 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 LCN12Q6JVE5 192 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 PLET1Q6UQ28 207 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 Q6ZRG5 221 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 GPHB5Q86YW7 130 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 LGI3Q8N145 548 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 OR10W1Q8NGF6 305 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 OR1P1Q8NH06 330 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 OR52E5Q8NH55 327 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 S100ZQ8WXG8 99 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 IL22RA2Q969J5 263 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 MRGPRFQ96AM1 343 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 GALNT14Q96FL9 552 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 TP53RKQ96S44 253 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 TXN2Q99757 166 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 SPAG8Q99932 426 aaPredicted RBP2.8□□□□□ -1.96
NUP88-202ENST00000570937 C7orf50Q9BRJ6 194 aaKnown RBP2.8□□□□□ -1.96
NUP88-202ENST00000570937 ALX4Q9H161 411 aaPredicted RBP2.8□□□□□ -1.96
NUP88-202ENST00000570937 NAA60Q9H7X0 242 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 SIGLEC8Q9NYZ4 499 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 TECRQ9NZ01 308 aaKnown RBP2.8□□□□□ -1.96
NUP88-202ENST00000570937 KLK9Q9UKQ9 250 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 F11RQ9Y624 299 aaKnown RBP2.8□□□□□ -1.96
NUP88-202ENST00000570937 V9GYH0 126 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 MEGF8Q7Z7M0 2845 aa2.8□□□□□ -1.96
NUP88-202ENST00000570937 IGHV3OR16-12A0A075B7B8 117 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 A0A0B4J2A0 478 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 DUXBA0A1W2PPF3 345 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 CEBPZOSA8MTT3 80 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 HSBP1L1C9JCN9 74 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 E7EUB6 86 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 INS-IGF2F8WCM5 200 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 NUPL2O15504 423 aaKnown RBP2.79□□□□□ -1.96
NUP88-202ENST00000570937 IFNA21P01568 189 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 IGKV1-39P01597 117 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 IGKV1D-39P04432 117 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 REG1AP05451 166 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 CD5P06127 495 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 SNRPCP09234 159 aaKnown RBP2.79□□□□□ -1.96
NUP88-202ENST00000570937 OR5AC1P0C628 307 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 SULT1A3P0DMM9 295 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 SULT1A4P0DMN0 295 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 BMI1P35226 326 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 HTR2BP41595 481 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 CCR6P51684 374 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 UBE2MP61081 183 aaKnown RBP2.79□□□□□ -1.96
NUP88-202ENST00000570937 WT1-ASQ06250 92 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 ZNF79Q15937 498 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms