RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 EREGO14944 169 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 TSC22D2O75157 780 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 TOMM40O96008 361 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 HBE1P02100 147 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 HOXB5P09067 269 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 OR10J1P30954 320 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 SAMD13Q5VXD3 122 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 ZNF705AQ6ZN79 300 aaPredicted RBP7.81□□□□□ -1.16
VPS53-207ENST00000570510 S100A7AQ86SG5 101 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 ZNF431Q8TF32 576 aaPredicted RBP7.81□□□□□ -1.16
VPS53-207ENST00000570510 TMEM170AQ8WVE7 144 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 SLC35E1Q96K37 410 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 SMIM8Q96KF7 97 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 TRGV9Q99603 122 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 GGACTQ9BVM4 153 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 NUDT15Q9NV35 164 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 STRAPQ9Y3F4 350 aaKnown RBP7.81□□□□□ -1.16
VPS53-207ENST00000570510 U3KQE9 123 aa7.81□□□□□ -1.16
VPS53-207ENST00000570510 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 ZNF705FA8MVS1 300 aaPredicted RBP7.8□□□□□ -1.16
VPS53-207ENST00000570510 SNRPGP15A8MWD9 76 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 WRBO00258 174 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 IFNA5P01569 189 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 IGKV3-20P01619 116 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 H2AFB2P0C5Z0 115 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 ZNF705DP0CH99 300 aaPredicted RBP7.8□□□□□ -1.16
VPS53-207ENST00000570510 ZNF705BP0CI00 300 aaPredicted RBP7.8□□□□□ -1.16
VPS53-207ENST00000570510 RD3LP0DJH9 198 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 RND2P52198 227 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 FXYD7P58549 80 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 C1orf194Q5T5A4 169 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 SYT8Q8NBV8 401 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 DCANP1Q8TF63 244 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 GPN1Q9HCN4 374 aaPredicted RBP7.8□□□□□ -1.16
VPS53-207ENST00000570510 FLVCR2Q9UPI3 526 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 GOLT1BQ9Y3E0 138 aa7.8□□□□□ -1.16
VPS53-207ENST00000570510 YTHDF2Q9Y5A9 579 aaKnown RBP7.8□□□□□ -1.16
VPS53-207ENST00000570510 LOC102723971A0A1B0GUV8 181 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 F5H768 121 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 H3BMM0 161 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 HNRNPCP07910 306 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS53-207ENST00000570510 ANXA7P20073 488 aaKnown RBP7.79□□□□□ -1.16
VPS53-207ENST00000570510 BTF3P20290 206 aaKnown RBP7.79□□□□□ -1.16
VPS53-207ENST00000570510 IAH1Q2TAA2 248 aaPredicted RBP7.79□□□□□ -1.16
VPS53-207ENST00000570510 THAP8Q8NA92 274 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 OR51G1Q8NGK1 321 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 ENKURQ8TC29 256 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 NPIPB3Q92617 1050 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 Q9H8V8 135 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 PRR13Q9NZ81 148 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 MDFICQ9P1T7 246 aa7.79□□□□□ -1.16
VPS53-207ENST00000570510 LINC00854A0A1B0GVQ3 168 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 PRSS46E5RG02 174 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 K7EPK0 472 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 SMR3BP02814 79 aaPredicted RBP7.78□□□□□ -1.16
VPS53-207ENST00000570510 SELENOTP62341 195 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 CYCSP99999 105 aaKnown RBP7.78□□□□□ -1.16
VPS53-207ENST00000570510 GAMTQ14353 236 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 RRN3P1Q2M238 152 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 SSX7Q7RTT5 188 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 TMEM144Q7Z5S9 345 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 C12orf45Q8N5I9 185 aaPredicted RBP7.78□□□□□ -1.16
VPS53-207ENST00000570510 ZBTB8BQ8NAP8 495 aaPredicted RBP7.78□□□□□ -1.16
VPS53-207ENST00000570510 MARVELD1Q9BSK0 173 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 TMEM208Q9BTX3 173 aa7.78□□□□□ -1.16
VPS53-207ENST00000570510 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
VPS53-207ENST00000570510 ZFP92A6NM28 416 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 ADAP1O75689 374 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 PVALBP20472 110 aaPredicted RBP7.77□□□□□ -1.17
VPS53-207ENST00000570510 USF2Q15853 346 aaPredicted RBP7.77□□□□□ -1.17
VPS53-207ENST00000570510 MLANAQ16655 118 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 TIGITQ495A1 244 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 SERTAD4-AS1Q5TG53 156 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 PXDC1Q5TGL8 231 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 TMEM14EPQ6UXP3 125 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 Q6ZSN1 163 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 OR10P1Q8NGE3 313 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 C2orf50Q96LR7 162 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 C17orf77Q96MU5 243 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 MAGT1Q9H0U3 335 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 PSENENQ9NZ42 101 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 MRPL36Q9P0J6 103 aaKnown RBP7.77□□□□□ -1.17
VPS53-207ENST00000570510 LINC00588Q9Y4M8 146 aa7.77□□□□□ -1.17
VPS53-207ENST00000570510 BUB3O43684 328 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 DEFB130BP0DP73 79 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 DEFB130AP0DP74 79 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 PSG1P11464 419 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 HLA-DRB4P13762 266 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 XGP55808 180 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 SPANXN5Q5MJ07 72 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 C16orf54Q6UWD8 224 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 OR4B1Q8NGF8 309 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 RNF125Q96EQ8 232 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 ACY3Q96HD9 319 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 GPR82Q96P67 336 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 NPVFQ9HCQ7 196 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 HLA-DRB4X5D2U9 266 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 MYCBP2O75592 4640 aa7.76□□□□□ -1.17
VPS53-207ENST00000570510 TRAV6A0A075B6T7 132 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms