RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TRAPPC1Q9Y5R8 145 aa4.22□□□□□ -1.73
SF3B3-213ENST00000569687 SPTBN1Q01082 2364 aaKnown RBP4.21□□□□□ -1.73
SF3B3-213ENST00000569687 TRBV19A0A075B6N1 114 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 IGHV3-21A0A0B4J1V1 117 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 IGHV1-69DA0A0B4J2H0 117 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 IGHV4-61A0A0C4DH41 118 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 A1L4Q6 167 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 H3BRN7 92 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 J3QKU1 62 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 SLC17A3O00476 420 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 SCGB2A1O75556 95 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 NDUFB8O95169 186 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 TNFRSF6BO95407 300 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 LTAP01374 205 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 IGHV1-69P01742 117 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 TCRAP04437 139 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 CTSGP08311 255 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 IGLC2P0DOY2 106 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 ESDP10768 282 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 COX6B1P14854 86 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 S100A2P29034 98 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 SAA4P35542 130 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 NDPQ00604 133 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 Q0VG73 95 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 PDE6HQ13956 83 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 CLEC12BQ2HXU8 276 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 KLF17Q5JT82 389 aaPredicted RBP4.21□□□□□ -1.74
SF3B3-213ENST00000569687 WDR73Q6P4I2 378 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 RASL11AQ6T310 242 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 BPIFA4PQ86YQ2 179 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 WIPF2Q8TF74 440 aaPredicted RBP4.21□□□□□ -1.74
SF3B3-213ENST00000569687 RNF125Q96EQ8 232 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 GRAMD2BQ96HH9 432 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 FMC1Q96HJ9 113 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 LINC00479Q96M42 142 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 CCL19Q99731 98 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 ATG101Q9BSB4 218 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 FAM103A1Q9BTL3 118 aaKnown RBP4.21□□□□□ -1.74
SF3B3-213ENST00000569687 GPR61Q9BZJ8 451 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 PRSS22Q9GZN4 317 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 ZNF586Q9NXT0 402 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 FLNCQ14315 2725 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 PLXNB1O43157 2135 aa4.21□□□□□ -1.74
SF3B3-213ENST00000569687 DOPEY1Q5JWR5 2465 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 XKRY2A2RUG3 117 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 FAM231BA6NCW3 169 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 IZUMO1RA6ND01 250 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 FBLL1A6NHQ2 334 aaKnown RBP4.2□□□□□ -1.74
SF3B3-213ENST00000569687 GATCO43716 136 aaKnown RBP4.2□□□□□ -1.74
SF3B3-213ENST00000569687 GNG7O60262 68 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 ZNF253O75346 499 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 IGLV2-11P01706 119 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 MT-ND6P03923 174 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 SLC25A5P05141 298 aaKnown RBP4.2□□□□□ -1.74
SF3B3-213ENST00000569687 HNF1AP20823 631 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 GATA3P23771 443 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 ATP5J2P56134 94 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 LYZP61626 148 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 C19orf54Q5BKX5 351 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 IBA57Q5T440 356 aaKnown RBP4.2□□□□□ -1.74
SF3B3-213ENST00000569687 GFI1BQ5VTD9 330 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 CLEC2AQ6UVW9 174 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 COX8CQ7Z4L0 72 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 OR8I2Q8N0Y5 310 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 BCL6BQ8N143 479 aaPredicted RBP4.2□□□□□ -1.74
SF3B3-213ENST00000569687 C5orf56Q8N8D9 126 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 NUDT10Q8NFP7 164 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 OR4F17Q8NGA8 305 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 ZNF502Q8TBZ5 544 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 BLNKQ8WV28 456 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 NUDT11Q96G61 164 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 ZNF414Q96IQ9 312 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 PACRGQ96M98 296 aaPredicted RBP4.2□□□□□ -1.74
SF3B3-213ENST00000569687 HIST1H2BLQ99880 126 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 RNASE7Q9H1E1 156 aaKnown RBP4.2□□□□□ -1.74
SF3B3-213ENST00000569687 Q9H3A6 140 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 ZFP30Q9Y2G7 519 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 ARHGAP32A7KAX9 2087 aa4.2□□□□□ -1.74
SF3B3-213ENST00000569687 NAV3Q8IVL0 2385 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 TRAV34A0A0B4J273 112 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 SERTM2A0A1B0GWG4 89 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 C19orf71A6NCJ1 209 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 A6NDX4 124 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 ZNF705GA8MUZ8 300 aaPredicted RBP4.19□□□□□ -1.74
SF3B3-213ENST00000569687 A8MWL6 223 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 B4DSR2 109 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 OR2J3O76001 311 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 AMBPP02760 352 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 IL4P05112 153 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 MGST1P10620 155 aaKnown RBP4.19□□□□□ -1.74
SF3B3-213ENST00000569687 SLC25A16P16260 332 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 RPL7P18124 248 aaKnown RBP4.19□□□□□ -1.74
SF3B3-213ENST00000569687 RAB9AP51151 201 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 FOXA3P55318 350 aaPredicted RBP4.19□□□□□ -1.74
SF3B3-213ENST00000569687 UBE2G1P62253 170 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 GNG5P63218 68 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 PAFAH1B2P68402 229 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 PSG9Q00887 426 aa4.19□□□□□ -1.74
SF3B3-213ENST00000569687 JOSD1Q15040 202 aaPredicted RBP4.19□□□□□ -1.74
SF3B3-213ENST00000569687 Q56UQ5 140 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms