RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 LTAP01374 205 aa8.78□□□□□ -1
CLK3-226ENST00000569406 COL8A1P27658 744 aa8.78□□□□□ -1
CLK3-226ENST00000569406 SMCPP49901 116 aaPredicted RBP8.78□□□□□ -1
CLK3-226ENST00000569406 SEC61GP60059 68 aa8.78□□□□□ -1
CLK3-226ENST00000569406 CACNG7P62955 275 aa8.78□□□□□ -1
CLK3-226ENST00000569406 RASL10AQ92737 203 aa8.78□□□□□ -1
CLK3-226ENST00000569406 ZNF488Q96MN9 340 aa8.78□□□□□ -1
CLK3-226ENST00000569406 C1orf43Q9BWL3 253 aa8.78□□□□□ -1
CLK3-226ENST00000569406 PGLYRP1O75594 196 aaPredicted RBP8.78□□□□□ -1
CLK3-226ENST00000569406 LPAL2Q16609 132 aa8.78□□□□□ -1
CLK3-226ENST00000569406 OR2H1Q9GZK4 316 aa8.78□□□□□ -1
CLK3-226ENST00000569406 TMEM133Q9H2Q1 129 aa8.78□□□□□ -1
CLK3-226ENST00000569406 KLK5Q9Y337 293 aaPredicted RBP8.78□□□□□ -1
CLK3-226ENST00000569406 IGKV1-12A0A0C4DH73 117 aa8.78□□□□□ -1
CLK3-226ENST00000569406 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
CLK3-226ENST00000569406 C16orf97H3BN30 126 aa8.78□□□□□ -1
CLK3-226ENST00000569406 IGKV1D-12P01611 117 aa8.78□□□□□ -1
CLK3-226ENST00000569406 PRADC1Q9BSG0 188 aa8.78□□□□□ -1
CLK3-226ENST00000569406 MGAQ8IWI9 3026 aa8.77□□□□□ -1
CLK3-226ENST00000569406 MBD3L4A6NDZ8 208 aaPredicted RBP8.77□□□□□ -1
CLK3-226ENST00000569406 MBD3L3A6NE82 208 aaPredicted RBP8.77□□□□□ -1
CLK3-226ENST00000569406 ZNF503-AS2A6NEH8 195 aa8.77□□□□□ -1
CLK3-226ENST00000569406 MBD3L5A6NJ08 208 aaPredicted RBP8.77□□□□□ -1
CLK3-226ENST00000569406 RBPMS2Q6ZRY4 209 aaKnown RBP8.77□□□□□ -1
CLK3-226ENST00000569406 OR13A1Q8NGR1 328 aa8.77□□□□□ -1
CLK3-226ENST00000569406 PCNX1Q96RV3 2341 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 RIF1Q5UIP0 2472 aaKnown RBP8.77□□□□□ -1.01
CLK3-226ENST00000569406 HIGD1CA8MV81 97 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 UCNP55089 124 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 C12orf74Q32Q52 190 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 C9orf153Q5TBE3 101 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 CFAP126Q5VTH2 177 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 HRCT1Q6UXD1 115 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 FGF23Q9GZV9 251 aaPredicted RBP8.77□□□□□ -1.01
CLK3-226ENST00000569406 PKDREJQ9NTG1 2253 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 MEOX1P50221 254 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 KIR2DL5BQ8NHK3 375 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 RPEQ96AT9 228 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 ZNF747Q9BV97 191 aa8.77□□□□□ -1.01
CLK3-226ENST00000569406 SPTBN1Q01082 2364 aaKnown RBP8.76□□□□□ -1.01
CLK3-226ENST00000569406 IGLC6P0CF74 106 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 FOLR3P41439 243 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 KLF17Q5JT82 389 aaPredicted RBP8.76□□□□□ -1.01
CLK3-226ENST00000569406 OR1L4Q8NGR5 311 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 LINC01587Q99440 93 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 LY96Q9Y6Y9 160 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 AKAP6Q13023 2319 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 KALRNO60229 2985 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 CACNA1HO95180 2353 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 MRPL33O75394 65 aaKnown RBP8.76□□□□□ -1.01
CLK3-226ENST00000569406 GCHFRP30047 84 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 RRN3P1Q2M238 152 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 OR10J6PQ8NGY7 276 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 HES7Q9BYE0 225 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 J3QLI3 93 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 DNPH1O43598 174 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 OR2J3O76001 311 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 SPINK14Q6IE38 97 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 PCSK4Q6UW60 755 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 TMEM14EPQ6UXP3 125 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 TEN1Q86WV5 123 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 LOXL2Q9Y4K0 774 aa8.76□□□□□ -1.01
CLK3-226ENST00000569406 CDX4O14627 284 aaPredicted RBP8.75□□□□□ -1.01
CLK3-226ENST00000569406 CEND1Q8N111 149 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 DEFB123Q8N688 67 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 OR4C13Q8NGP0 309 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 DLX4Q92988 240 aaPredicted RBP8.75□□□□□ -1.01
CLK3-226ENST00000569406 LINC00479Q96M42 142 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 FOXB1Q99853 325 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 ZNF718Q3SXZ3 478 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 MIC13Q5XKP0 118 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 SSMEM1Q8WWF3 244 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 WNK2Q9Y3S1 2297 aa8.75□□□□□ -1.01
CLK3-226ENST00000569406 TMEM213A2RRL7 107 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 OR2H2O95918 312 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 IGHV3-13P01766 116 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 APOHP02749 345 aaPredicted RBP8.74□□□□□ -1.01
CLK3-226ENST00000569406 HERVK_113P63121 156 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 PLA2G2CQ5R387 149 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 IDI2-AS1Q9NZ38 188 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 PKIGQ9Y2B9 76 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 AGRNO00468 2067 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 CD59P13987 128 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 FXYD7P58549 80 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 CIARTQ8N365 385 aaPredicted RBP8.74□□□□□ -1.01
CLK3-226ENST00000569406 WIPF2Q8TF74 440 aaPredicted RBP8.74□□□□□ -1.01
CLK3-226ENST00000569406 DMXL2Q8TDJ6 3036 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 CUL9Q8IWT3 2517 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 FAM90A18PA6NE21 464 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 FAM90A16PA6NEW6 464 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 FAM90A8PA6NJQ4 464 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 FAM90A9PA6NNJ1 464 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 ACTL6BO94805 426 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 AREGP15514 252 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 LRRC75A-AS1Q8N1F1 130 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 PRSS3P2Q8NHM4 247 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 MRAPQ8TCY5 172 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 LINC00477Q96M19 166 aa8.74□□□□□ -1.01
CLK3-226ENST00000569406 AKAP13Q12802 2813 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms