RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	TMEM37	Q8WXS4	190 aa		11.22	□□□□□ -0.61
KLHDC4-223	ENST00000568499	UHRF2	Q96PU4	802 aa		11.22	□□□□□ -0.61
KLHDC4-223	ENST00000568499	SCRT1	Q9BWW7	348 aa		11.22	□□□□□ -0.61
KLHDC4-223	ENST00000568499	MRPL32	Q9BYC8	188 aa	Known RBP	11.22	□□□□□ -0.61
KLHDC4-223	ENST00000568499	SELENOK	Q9Y6D0	94 aa		11.22	□□□□□ -0.61
KLHDC4-223	ENST00000568499	TRAV2	A0A0B4J234	112 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499		A0A1W2PPV4	95 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	IZUMO1R	A6ND01	250 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	TPT1	P13693	172 aa	Known RBP	11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	ATF4	P18848	351 aa	Predicted RBP	11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	M6PR	P20645	277 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	MEOX2	P50222	304 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	RHOB	P62745	196 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	CD300C	Q08708	224 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	EIF5AL1	Q6IS14	154 aa	Known RBP	11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	BPIFA4P	Q86YQ2	179 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	CYTL1	Q9NRR1	136 aa		11.21	□□□□□ -0.61
KLHDC4-223	ENST00000568499	TFPI2	P48307	235 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	TAS2R45	P59539	299 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	KRTAP10-11	P60412	298 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	LEMD1	Q68G75	181 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	WFDC3	Q8IUB2	231 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	GBGT1	Q8N5D6	347 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	SLC25A32	Q9H2D1	315 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	MS4A6A	Q9H2W1	248 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	NRN1	Q9NPD7	142 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	FUT9	Q9Y231	359 aa		11.2	□□□□□ -0.62
KLHDC4-223	ENST00000568499	ID1	P41134	155 aa		11.19	□□□□□ -0.62
KLHDC4-223	ENST00000568499	GCSAML	Q5JQS6	135 aa		11.19	□□□□□ -0.62
KLHDC4-223	ENST00000568499	AKR1C8P	Q5T2L2	129 aa		11.19	□□□□□ -0.62
KLHDC4-223	ENST00000568499	BAP18	Q8IXM2	172 aa		11.19	□□□□□ -0.62
KLHDC4-223	ENST00000568499	OR10G4	Q8NGN3	311 aa		11.19	□□□□□ -0.62
KLHDC4-223	ENST00000568499	OR10G9	Q8NGN4	311 aa		11.19	□□□□□ -0.62
KLHDC4-223	ENST00000568499	OR10G7	Q8NGN6	311 aa		11.19	□□□□□ -0.62
KLHDC4-223	ENST00000568499	SH3BGRL3	Q9H299	93 aa		11.19	□□□□□ -0.62
KLHDC4-223	ENST00000568499	CD81	P60033	236 aa		11.18	□□□□□ -0.62
KLHDC4-223	ENST00000568499	SNRPD3	P62318	126 aa	Known RBP	11.18	□□□□□ -0.62
KLHDC4-223	ENST00000568499	TMEM41B	Q5BJD5	291 aa		11.18	□□□□□ -0.62
KLHDC4-223	ENST00000568499	SLC51B	Q86UW2	128 aa		11.18	□□□□□ -0.62
KLHDC4-223	ENST00000568499	C9orf62	Q8N4C0	152 aa		11.18	□□□□□ -0.62
KLHDC4-223	ENST00000568499	LRRC20	Q8TCA0	184 aa		11.18	□□□□□ -0.62
KLHDC4-223	ENST00000568499	PRR25	Q96S07	402 aa		11.18	□□□□□ -0.62
KLHDC4-223	ENST00000568499	SEC11B	P0C7V7	166 aa		11.17	□□□□□ -0.62
KLHDC4-223	ENST00000568499	SPP1	P10451	314 aa		11.17	□□□□□ -0.62
KLHDC4-223	ENST00000568499	GUK1	Q16774	197 aa		11.17	□□□□□ -0.62
KLHDC4-223	ENST00000568499	KHDC3L	Q587J8	217 aa		11.17	□□□□□ -0.62
KLHDC4-223	ENST00000568499	STOML3	Q8TAV4	291 aa		11.17	□□□□□ -0.62
KLHDC4-223	ENST00000568499	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.17	□□□□□ -0.62
KLHDC4-223	ENST00000568499	SEPSECS	Q9HD40	501 aa	Known RBP	11.17	□□□□□ -0.62
KLHDC4-223	ENST00000568499	TRAV5	A0A0B4J249	113 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	OR11H12	B2RN74	326 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	UMAD1	C9J7I0	102 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	RAB2A	P61019	212 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	FAM122C	Q6P4D5	195 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	MIR17HG	Q75NE6	70 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	C16orf92	Q96LL3	132 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	FAM110A	Q9BQ89	295 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	TMEM14C	Q9P0S9	112 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499	RFNG	Q9Y644	331 aa		11.16	□□□□□ -0.62
KLHDC4-223	ENST00000568499		A0A087X0K7	114 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499		K7EQG2	157 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	OR7C2	O60412	319 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	CDC34	P49427	236 aa	Predicted RBP	11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	MORN5	Q5VZ52	161 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	LCN15	Q6UWW0	184 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	DCANP1	Q8TF63	244 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	PAXX	Q9BUH6	204 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	OR51M1	Q9H341	326 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	HRH4	Q9H3N8	390 aa		11.15	□□□□□ -0.62
KLHDC4-223	ENST00000568499	ISLR	O14498	428 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	HIST1H1E	P10412	219 aa	Known RBP	11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	PSMB3	P49720	205 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	NKX2-5	P52952	324 aa	Predicted RBP	11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	SPATA31B1P	Q5VZV4	182 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	PQLC2	Q6ZP29	291 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	SLC25A2	Q9BXI2	301 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	TUBA4B	Q9H853	241 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	RPRM	Q9NS64	109 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	CLEC5A	Q9NY25	188 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	SMAD5-AS1	Q9Y6J3	95 aa		11.14	□□□□□ -0.63
KLHDC4-223	ENST00000568499	CMYA5	Q8N3K9	4069 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	PRB2	P02812	416 aa	Predicted RBP	11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	CD7	P09564	240 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	RAB5C	P51148	216 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	DEFA6	Q01524	100 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	DEFB121	Q5J5C9	76 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	DPPA3	Q6W0C5	159 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	RPP25L	Q8N5L8	163 aa	Known RBP	11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	LINC00052	Q96N35	136 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	SLC50A1	Q9BRV3	221 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	SORL1	Q92673	2214 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	NOTCH1	P46531	2555 aa		11.13	□□□□□ -0.63
KLHDC4-223	ENST00000568499	CTXND1	A0A1B0GTU2	59 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	MRPS12	O15235	138 aa	Known RBP	11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	ZNF688	P0C7X2	276 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	IGLC2	P0DOY2	106 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	PSG9	Q00887	426 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms