RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TRAV34A0A0B4J273 112 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 IGHV3-66A0A0C4DH42 116 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 COLCA2A8K830 154 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 H7BYZ3 331 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 CLDN34H7C241 214 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 BMPR1BO00238 502 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 ZNF207O43670 478 aaKnown RBP5.49□□□□□ -1.53
SMG1-215ENST00000568239 GNG4P50150 75 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 RPL15P61313 204 aaKnown RBP5.49□□□□□ -1.53
SMG1-215ENST00000568239 RELQ04864 619 aaPredicted RBP5.49□□□□□ -1.53
SMG1-215ENST00000568239 Q6YL49 198 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 OR8I2Q8N0Y5 310 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 OCC1Q8TAD7 63 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 OR5B12Q96R08 314 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 GAR1Q9NY12 217 aaKnown RBP5.49□□□□□ -1.53
SMG1-215ENST00000568239 RABAC1Q9UI14 185 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 A0A087WWC5 75 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 IGHV3-49A0A0A0MS15 119 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 H3BRN7 92 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 TGOLN2O43493 480 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 PPIFP30405 207 aaKnown RBP5.49□□□□□ -1.53
SMG1-215ENST00000568239 CENPWQ5EE01 88 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 TOMM20LQ6UXN7 152 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 EXOC3-AS1Q8N2X6 119 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 NHLRC2Q8NBF2 726 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 C11orf52Q96A22 123 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 C17orf77Q96MU5 243 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 Q9H3A6 140 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 ZNF586Q9NXT0 402 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 MLXQ9UH92 298 aa5.49□□□□□ -1.53
SMG1-215ENST00000568239 FAM223BA6NKX1 122 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 FSHBP01225 129 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 CRYBA1P05813 215 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 HIST1H1EP10412 219 aaKnown RBP5.48□□□□□ -1.53
SMG1-215ENST00000568239 MGST1P10620 155 aaKnown RBP5.48□□□□□ -1.53
SMG1-215ENST00000568239 FAM223AQ8IWN6 122 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 ZFP82Q8N141 532 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 CMTM2Q8TAZ6 248 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 HIST1H2BAQ96A08 127 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 TUBA4BQ9H853 241 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 YAE1D1Q9NRH1 226 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 TGIF2-C20orf24A0A0A6YYL0 155 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 PEX7O00628 323 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 NDUFS6O75380 124 aaKnown RBP5.48□□□□□ -1.53
SMG1-215ENST00000568239 TRBV12-3P01733 135 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 ARL3P36405 182 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 CNN1P51911 297 aaKnown RBP5.48□□□□□ -1.53
SMG1-215ENST00000568239 CRIP2P52943 208 aaPredicted RBP5.48□□□□□ -1.53
SMG1-215ENST00000568239 UBE2G1P62253 170 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 OR5I1Q13606 314 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 C19orf54Q5BKX5 351 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 SIGLECL1Q8N7X8 197 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 C2CD4CQ8TF44 421 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 FOXC2Q99958 501 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 HIVEP2P31629 2446 aa5.48□□□□□ -1.53
SMG1-215ENST00000568239 RPS10P46783 165 aaKnown RBP5.47□□□□□ -1.53
SMG1-215ENST00000568239 RAB9AP51151 201 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 ELOBQ15370 118 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 C10orf99Q6UWK7 81 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 C9orf139Q6ZV77 190 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 PRSS22Q9GZN4 317 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 NPFFR1Q9GZQ6 430 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 CTDSP1Q9GZU7 261 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 EPDR1Q9UM22 224 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 ZNF320A2RRD8 509 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 RAB5AP20339 215 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 GALR1P47211 349 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 ERVFC1-1P60608 527 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 OR4X2Q8NGF9 303 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 SFRP2Q96HF1 295 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 TMEM14CQ9P0S9 112 aa5.47□□□□□ -1.53
SMG1-215ENST00000568239 A0A1W2PPQ1 181 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 CXorf65A6NEN9 183 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 K7EN84 100 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 SLC17A3O00476 420 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 ISLRO14498 428 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 CXCL1P09341 107 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 RPL7P18124 248 aaKnown RBP5.46□□□□□ -1.53
SMG1-215ENST00000568239 S100PP25815 95 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 PRR27Q6MZM9 219 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 BAGE2Q86Y30 109 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 C5orf17Q8NAS9 161 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 USMG5Q96IX5 58 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 TMEM242Q9NWH2 141 aa5.46□□□□□ -1.53
SMG1-215ENST00000568239 TRBV19A0A075B6N1 114 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 A0A0G2JLM5 398 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 ZNF785A8K8V0 405 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 C9JCJ5 164 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 IGLC2P0DOY2 106 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 S100A7P31151 101 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 OR10G8Q8NGN5 311 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 METTL26Q96S19 204 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 AAMDCQ9H7C9 122 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 ZFAND3Q9H8U3 227 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 SERTAD4Q9NUC0 356 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 RNF24Q9Y225 148 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 NF1P21359 2839 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 TRAV8-1A0A0A6YYK1 113 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 H3BUA1 57 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 M0R3E3 92 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms