RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 HRASLSQ9HDD0 168 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 RAB18Q9NP72 206 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 ABCB9Q9NP78 766 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 SLC35D1Q9NTN3 355 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 SCN3BQ9NY72 215 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 COA4Q9NYJ1 87 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 IL36GQ9NZH8 169 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 GHRLQ9UBU3 117 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 PEF1Q9UBV8 284 aaKnown RBP0.74□□□□□ -2.29
SMG1-212ENST00000566328 ENOPH1Q9UHY7 261 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 PITPNC1Q9UKF7 332 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 RAB22AQ9UL26 194 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 WASHC3Q9Y3C0 194 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 LRRC42Q9Y546 428 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 HSPE1-MOB4S4R3N1 261 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 MYCBP2O75592 4640 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 TNXBP22105 4242 aa0.74□□□□□ -2.29
SMG1-212ENST00000566328 STAB2Q8WWQ8 2551 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 SRRM2Q9UQ35 2752 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 TRBV9A0A0B4J1U6 114 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TRAV1-2A0A0B4J238 106 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 A0A0G2JRQ6 117 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 LOC100131303A0A0U1RQF7 123 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TMEM213A2RRL7 107 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 METTL21EPA6NDL7 271 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 C2orf70A6NJV1 201 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 OOSP1A8MZH6 123 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 H3BTX0 84 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 M0QZK8 103 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 UPK2O00526 184 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 FGF16O43320 207 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 EIF3GO75821 320 aaKnown RBP eCLIP0.73□□□□□ -2.29
SMG1-212ENST00000566328 OR2A4O95047 310 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 YIF1AO95070 293 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 NDUFA3O95167 84 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 LY6G6CO95867 125 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 MT-CO2P00403 227 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PPYP01298 95 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 IGLV1-51P01701 117 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 HLA-DRB1P01911 266 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 CD3DP04234 171 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 GLAP06280 429 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 CTSDP07339 412 aaPredicted RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 CTSGP08311 255 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 LGALS1P09382 135 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 SAA1P0DJI8 122 aaPredicted RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 OR5H8P0DN80 308 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 DEFA4P12838 97 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 HIST1H1DP16402 221 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 CTRB1P17538 263 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 HLA-GP17693 338 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PSMA1P25786 263 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 IL3RAP26951 378 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PSMB6P28072 239 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 HRH1P35367 487 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 MAS1LP35410 378 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 LGALS7P47929 136 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 KCNJ3P48549 501 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 SERPINB10P48595 397 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PSMD7P51665 324 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 ZNF137PP52743 207 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 EMP1P54849 157 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TAS2R19P59542 299 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 GNG2P59768 71 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 OR2B8PP59922 312 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 UBE2KP61086 200 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TSPAN5P62079 268 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 HLA-DRB3P79483 266 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 MRPS15P82914 257 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 ZNF90Q03938 601 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TMEM267Q0VDI3 215 aaPredicted RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 MLLT11Q13015 90 aaPredicted RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 OR2F1Q13607 317 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 SPCS2Q15005 226 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 RPEL1Q2QD12 228 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 GDF5OSQ5U4N7 250 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 AADACL3Q5VUY0 350 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 UBE2UQ5VVX9 321 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 GPR107Q5VW38 600 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 CTRB2Q6GPI1 263 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 OR8G2PQ6IF36 304 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 SFXN4Q6P4A7 337 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 CNIH2Q6PI25 160 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 CD200R1LQ6Q8B3 271 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PLET1Q6UQ28 207 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TOMM20LQ6UXN7 152 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 LINC00322Q6ZN03 302 aaPredicted RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 Q6ZQT7 251 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 LYZL2Q7Z4W2 148 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 LINC00596Q86U02 117 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TMEM17Q86X19 198 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 CDH26Q8IXH8 852 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TTC9CQ8N5M4 171 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 COMMD1Q8N668 190 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PACRGLQ8N7B6 248 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 C8orf31Q8N9H6 132 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 NKAPP1Q8N9T2 125 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 UBAC2Q8NBM4 344 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 CCDC54Q8NEL0 328 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms