RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PAFAH1B2P68402 229 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 DPPA3Q6W0C5 159 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 IL34Q6ZMJ4 242 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 TCF24Q7RTU0 167 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 BPIFA4PQ86YQ2 179 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 RNF141Q8WVD5 230 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 SCRT1Q9BWW7 348 aa5.91□□□□□ -1.46
CDH1-208ENST00000565810 SEPSECSQ9HD40 501 aaKnown RBP5.91□□□□□ -1.46
CDH1-208ENST00000565810 TRAV5A0A0B4J249 113 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 TRAV25A0A0B4J276 109 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 CTXND1A0A1B0GTU2 59 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 DNASE2O00115 360 aaPredicted RBP5.9□□□□□ -1.46
CDH1-208ENST00000565810 OR7C2O60412 319 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 ATF4P18848 351 aaPredicted RBP5.9□□□□□ -1.46
CDH1-208ENST00000565810 EDN2P20800 178 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 SULT1A2P50226 295 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 DEFB114Q30KQ6 69 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 KHDC3LQ587J8 217 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 LEMD1Q68G75 181 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 ALKAL2Q6UX46 152 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 SIGLEC15Q6ZMC9 328 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 PQLC2Q6ZP29 291 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 MIR17HGQ75NE6 70 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 RPP25LQ8N5L8 163 aaKnown RBP5.9□□□□□ -1.46
CDH1-208ENST00000565810 OR2K2Q8NGT1 345 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 FAM213BQ8TBF2 198 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 LRRC20Q8TCA0 184 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 GLMPQ8WWB7 406 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 RAB24Q969Q5 203 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 PAXXQ9BUH6 204 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 ZMAT5Q9UDW3 170 aaKnown RBP5.9□□□□□ -1.46
CDH1-208ENST00000565810 MLXQ9UH92 298 aa5.9□□□□□ -1.46
CDH1-208ENST00000565810 CMYA5Q8N3K9 4069 aa5.9□□□□□ -1.47
CDH1-208ENST00000565810 IGKV3-7A0A075B6H7 116 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 ZNF705EA8MWA4 302 aaPredicted RBP5.89□□□□□ -1.47
CDH1-208ENST00000565810 CXorf1O96002 111 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 H2AFB1P0C5Y9 115 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 STAG3L2P0CL84 134 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 STAG3L3P0CL85 134 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 IGLL1P15814 213 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 MEOX2P50222 304 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 BLOC1S1P78537 153 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 CD300EQ496F6 205 aaPredicted RBP5.89□□□□□ -1.47
CDH1-208ENST00000565810 SAMD13Q5VXD3 122 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 SPATA31B1PQ5VZV4 182 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 LCN12Q6JVE5 192 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 TEX261Q6UWH6 196 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 LCN15Q6UWW0 184 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 ADAMTSL5Q6ZMM2 481 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 IQCF2Q8IXL9 164 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 SFT2D1Q8WV19 159 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 OR51M1Q9H341 326 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 TMEM14CQ9P0S9 112 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 UBQLN2Q9UHD9 624 aa5.89□□□□□ -1.47
CDH1-208ENST00000565810 MAP1LC3B2A6NCE7 125 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 TSPAN4O14817 238 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 HMGB3O15347 200 aaKnown RBP5.88□□□□□ -1.47
CDH1-208ENST00000565810 IGLV1-51P01701 117 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 HBE1P02100 147 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 HIST1H1EP10412 219 aaKnown RBP5.88□□□□□ -1.47
CDH1-208ENST00000565810 ID1P41134 155 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 FHITP49789 147 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 RAB14P61106 215 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 GUCA2BQ16661 112 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 GUK1Q16774 197 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 FAM74A1Q5RGS3 127 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 MORN5Q5VZ52 161 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 FAM90A2PQ658T7 463 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 WFDC3Q8IUB2 231 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 ZNF680Q8NEM1 530 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 FAM167A-AS1Q96KT0 104 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 C16orf92Q96LL3 132 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 SPAG8Q99932 426 aaPredicted RBP5.88□□□□□ -1.47
CDH1-208ENST00000565810 SLC25A2Q9BXI2 301 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 MAP1LC3BQ9GZQ8 125 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 HRH4Q9H3N8 390 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 NRN1Q9NPD7 142 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 TMEM167BQ9NRX6 74 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 PLA2G2EQ9NZK7 142 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 SELENOKQ9Y6D0 94 aa5.88□□□□□ -1.47
CDH1-208ENST00000565810 A0A087X0K7 114 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 TRAV2A0A0B4J234 112 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 OR4C46A6NHA9 309 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 EIF3GO75821 320 aaKnown RBP eCLIP5.87□□□□□ -1.47
CDH1-208ENST00000565810 NBEAP1P0C6P0 100 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 PYYP10082 97 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 TFPI2P48307 235 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 PPT1P50897 306 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 CMC4P56277 68 aaPredicted RBP5.87□□□□□ -1.47
CDH1-208ENST00000565810 UBE2L3P68036 154 aaKnown RBP5.87□□□□□ -1.47
CDH1-208ENST00000565810 ZNF726P1Q15940 193 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 ZNF767PQ75MW2 155 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 TMEM61Q8N0U2 210 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 GBGT1Q8N5D6 347 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 BLNKQ8WV28 456 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 MBD3L1Q8WWY6 194 aa5.87□□□□□ -1.47
CDH1-208ENST00000565810 SAT2Q96F10 170 aaPredicted RBP5.87□□□□□ -1.47
CDH1-208ENST00000565810 MS4A6AQ9H2W1 248 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms