RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ORM2P19652 201 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
LINC00554-201ENST00000564841 HSD52Q0P140 79 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 FLYWCH2Q96CP2 140 aaKnown RBP13.06□□□□□ -0.32
LINC00554-201ENST00000564841 SIGMAR1Q99720 223 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 ZNF257Q9Y2Q1 563 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 TEX50A0A1B0GTY4 177 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 M0R1B8 84 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 SPRY3O43610 288 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 IFI27P40305 119 aaPredicted RBP13.06□□□□□ -0.32
LINC00554-201ENST00000564841 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 C10orf113Q5VZT2 155 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 NPIPB3Q92617 1050 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 ADTRPQ96IZ2 230 aa13.06□□□□□ -0.32
LINC00554-201ENST00000564841 A1L4Q6 167 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 CACNG7P62955 275 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 LRBAP50851 2863 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 RNASE2P10153 161 aaKnown RBP13.05□□□□□ -0.32
LINC00554-201ENST00000564841 RAB9AP51151 201 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 WFDC2Q14508 124 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 PSG3Q16557 428 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 SH2D6Q7Z4S9 175 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 GPR82Q96P67 336 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 A0A096LNJ9 63 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 ARMS2P0C7Q2 107 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 C10orf55Q5SWW7 151 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 FAM162BQ5T6X4 162 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 LINC00305Q7Z4B0 112 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 NDFIP1Q9BT67 221 aa13.05□□□□□ -0.32
LINC00554-201ENST00000564841 IGKV1D-17A0A075B6S4 117 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 IGHV3-21A0A0B4J1V1 117 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 IQCF6A8MYZ5 107 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 C22orf46C9J442 243 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 CD69Q07108 199 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 FAM27E3Q08E93 113 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 PRR30Q53SZ7 412 aaPredicted RBP13.04□□□□□ -0.32
LINC00554-201ENST00000564841 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
LINC00554-201ENST00000564841 PRSS22Q9GZN4 317 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 FABP2P12104 132 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 GCSHP23434 173 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 CFHR2P36980 270 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 FXYD2P54710 66 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 BOD1L2Q8IYS8 172 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 FAM215AQ9Y5M1 114 aa13.04□□□□□ -0.32
LINC00554-201ENST00000564841 TRAV26-1A0A087WT03 109 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 CEACAM4O75871 244 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 CCDC144NLQ6NUI1 221 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 INO80CQ6PI98 192 aaPredicted RBP13.03□□□□□ -0.32
LINC00554-201ENST00000564841 MOGAT3Q86VF5 341 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 DAZAP1Q96EP5 407 aaKnown RBP13.03□□□□□ -0.32
LINC00554-201ENST00000564841 MAP1AP78559 2803 aaPredicted RBP13.03□□□□□ -0.32
LINC00554-201ENST00000564841 GAGE12HA6NDE8 117 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 PRCDQ00LT1 54 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 Q6ZS92 163 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 ATP6V0BQ99437 205 aa13.03□□□□□ -0.32
LINC00554-201ENST00000564841 SMAD7O15105 426 aaKnown RBP13.02□□□□□ -0.32
LINC00554-201ENST00000564841 APELAP0DMC3 54 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 COL8A1P27658 744 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 ATP5G2Q06055 141 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 ZNF474Q6S9Z5 364 aaPredicted RBP13.02□□□□□ -0.32
LINC00554-201ENST00000564841 FA2HQ7L5A8 372 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 PDPNQ86YL7 162 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 JPT1Q9UK76 154 aa13.02□□□□□ -0.32
LINC00554-201ENST00000564841 LTAP01374 205 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 INSL3P51460 131 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 C22orf34Q6ZV56 151 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 CXXC4Q9H2H0 198 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 IGHV1-18A0A0C4DH31 117 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.02□□□□□ -0.33
LINC00554-201ENST00000564841 C19orf71A6NCJ1 209 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 FSTL3O95633 263 aa13.02□□□□□ -0.33
LINC00554-201ENST00000564841 ZCCHC24Q8N2G6 241 aaKnown RBP13.02□□□□□ -0.33
LINC00554-201ENST00000564841 MYCNOSP40205 109 aa13.01□□□□□ -0.33
LINC00554-201ENST00000564841 ASH1LQ9NR48 2969 aaKnown RBP13.01□□□□□ -0.33
LINC00554-201ENST00000564841 PLSCR4Q9NRQ2 329 aa13.01□□□□□ -0.33
LINC00554-201ENST00000564841 CALYQ9NYX4 217 aa13.01□□□□□ -0.33
LINC00554-201ENST00000564841 PRR7Q8TB68 274 aa13.01□□□□□ -0.33
LINC00554-201ENST00000564841 MRPL32Q9BYC8 188 aaKnown RBP13.01□□□□□ -0.33
LINC00554-201ENST00000564841 TMEM238LA0A1B0GVL6 79 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 hADV38S2A0JD32 116 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 UPK2O00526 184 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 SAA1P0DJI8 122 aaPredicted RBP13□□□□□ -0.33
LINC00554-201ENST00000564841 IGF2-ASQ6U949 168 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 AMTNQ6UX39 209 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 OR5A1Q8NGJ0 315 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 DKK2Q9UBU2 259 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 OVOL3O00110 214 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 PRB3Q04118 309 aaPredicted RBP13□□□□□ -0.33
LINC00554-201ENST00000564841 ETDBQ3ZM63 59 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 PRNTQ86SH4 94 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 ARPC1AQ92747 370 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 C19orf24Q9BVV8 132 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 SMPXQ9UHP9 88 aa13□□□□□ -0.33
LINC00554-201ENST00000564841 IGKV1D-37A0A075B6S9 117 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 IGKV3-15P01624 115 aa12.99□□□□□ -0.33
LINC00554-201ENST00000564841 IGKV2D-26A0A0A0MRZ7 120 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms