RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 HYPMO75409 117 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 IL5P05113 134 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 FXYD7P58549 80 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 RAP2BP61225 183 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 RRN3P1Q2M238 152 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 CYP2G1PQ6ZSU1 146 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 IGF2BP2-AS1Q96M15 143 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 SLC25A32Q9H2D1 315 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 SLC25A22Q9H936 323 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 NPVFQ9HCQ7 196 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 PSENENQ9NZ42 101 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 DNAH6Q9C0G6 4158 aa8.71□□□□□ -1.02
GTF3C1-204ENST00000564664 IGHV3OR16-12A0A075B7B8 117 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 OR4E1P0C645 316 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 RPL7P18124 248 aaKnown RBP8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 EMP1P54849 157 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 TAS2R30P59541 319 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 DEFB1P60022 68 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 POLR2GP62487 172 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 PXDC1Q5TGL8 231 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 TRIQKQ629K1 86 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 TMEM182Q6ZP80 229 aaPredicted RBP8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 ACOT7LQ6ZUV0 252 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 ZNF767PQ75MW2 155 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 C1orf158Q8N1D5 194 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 C20orf173Q96LM9 149 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 SHANK2-AS3Q9BTD1 123 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 CCDC32Q9BV29 185 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 SLC35B3Q9H1N7 401 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
GTF3C1-204ENST00000564664 LOC102723971A0A1B0GUV8 181 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 PMS2P5A8MQ11 134 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 F6UB75 175 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 K7EPK0 472 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 ADAP1O75689 374 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 GATA2P23769 480 aaPredicted RBP8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 DLK1P80370 383 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 C4orf46Q504U0 113 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 FAM222AQ5U5X8 452 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 AMTNQ6UX39 209 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 OR10P1Q8NGE3 313 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 C17orf77Q96MU5 243 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 TMEM208Q9BTX3 173 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 GGACTQ9BVM4 153 aa8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 SLC25A39Q9BZJ4 359 aaPredicted RBP8.69□□□□□ -1.02
GTF3C1-204ENST00000564664 SMCO3A2RU48 225 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 H3BP45 60 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 H3BRN7 92 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 PFDN1O60925 122 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 TSC22D2O75157 780 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 UPK1BO75841 260 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 BAK1Q16611 211 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 LGALS9BQ3B8N2 356 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 RNF212Q495C1 297 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 TEPPQ6URK8 271 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 TMEM14EPQ6UXP3 125 aa8.68□□□□□ -1.02
GTF3C1-204ENST00000564664 A0A087X0K7 114 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 TRAV8-2A0A0B4J237 113 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 LYRM9A8MSI8 78 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 SSSCA1O60232 199 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 TSPOP30536 169 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 CNN1P51911 297 aaKnown RBP8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 IAH1Q2TAA2 248 aaPredicted RBP8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 TMEM256Q8N2U0 113 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 CHAC2Q8WUX2 184 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 MITD1Q8WV92 249 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 MGAT4CQ9UBM8 478 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 FLVCR2Q9UPI3 526 aa8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 YTHDF2Q9Y5A9 579 aaKnown RBP8.67□□□□□ -1.02
GTF3C1-204ENST00000564664 PTTG1O95997 202 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 INSP01308 110 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 OR5G3P0C626 314 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 LINC00869P0C866 280 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 CXCL2P19875 107 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 BCAP31P51572 246 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 FAM3BP58499 235 aaPredicted RBP8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 DAD1P61803 113 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 FGL1Q08830 312 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 ZNF738Q8NE65 137 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 OR11H7Q8NGC8 314 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 LRRC20Q8TCA0 184 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 SCRT1Q9BWW7 348 aa8.66□□□□□ -1.02
GTF3C1-204ENST00000564664 GOSR2O14653 212 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 CRXO43186 299 aaPredicted RBP8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 METTL15P1P0C7V9 234 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 ANXA7P20073 488 aaKnown RBP8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 PSG3Q16557 428 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 ZNF546Q86UE3 836 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 UBE2DNLQ8IWF7 75 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 C15orf53Q8NAA6 179 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 ZBTB8BQ8NAP8 495 aaPredicted RBP8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 SDHCQ99643 169 aaPredicted RBP8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 ARL6Q9H0F7 186 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 PPP1R14DQ9NXH3 145 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 GSKIPQ9P0R6 139 aa8.65□□□□□ -1.02
GTF3C1-204ENST00000564664 HECTD4Q9Y4D8 3996 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 CXCL3P19876 107 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 DEFA1P59665 94 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 DEFA3P59666 94 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms