RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 CD109Q6YHK3 1445 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 SCN3AQ9NY46 2000 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 ZNF736B4DX44 427 aaPredicted RBP0.56□□□□□ -2.32
CHD9-211ENST00000564600 TMEM238C9JI98 176 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 C17orf112F2Z3M2 114 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 G3V2T6 193 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 H7C1C5 153 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 LYRM1O43325 122 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 FAM107AO95990 144 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 PHBP35232 272 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 DEFA1P59665 94 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 VBP1P61758 197 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 LCN6P62502 163 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 DEFB115Q30KQ5 88 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 DEFB113Q30KQ7 82 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 TRIQKQ629K1 86 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 EIF5AL1Q6IS14 154 aaKnown RBP0.56□□□□□ -2.32
CHD9-211ENST00000564600 C2orf82Q6UX34 121 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 PDZD9Q8IXQ8 264 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 FAM19A2Q8N3H0 131 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 STX19Q8N4C7 294 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 Q8N814 137 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 LINC00301Q8NCQ3 95 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 SLC30A7Q8NEW0 376 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 OR10K1Q8NGX5 313 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 STAG3L4Q8TBR4 150 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 SKA2Q8WVK7 121 aaPredicted RBP0.56□□□□□ -2.32
CHD9-211ENST00000564600 ISOC1Q96CN7 298 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 CCDC32Q9BV29 185 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 BIN3Q9NQY0 253 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 SSR3Q9UNL2 185 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 LAMTOR2Q9Y2Q5 125 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 LY96Q9Y6Y9 160 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
CHD9-211ENST00000564600 SYNMO15061 1565 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 FRMPD1Q5SYB0 1578 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 MUC2Q02817 5179 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 PTPN13Q12923 2485 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 ALPK3Q96L96 1907 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 NCOR2Q9Y618 2525 aa0.56□□□□□ -2.32
CHD9-211ENST00000564600 ROS1P08922 2347 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 COL1A1P02452 1464 aaPredicted RBP0.55□□□□□ -2.32
CHD9-211ENST00000564600 TLCD2A6NGC4 264 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 E7EQ34 232 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 HMGB3O15347 200 aaKnown RBP0.55□□□□□ -2.32
CHD9-211ENST00000564600 CCL16O15467 120 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 NDUFB3O43676 98 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 NUPR1O60356 82 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 IGLV1-51P01701 117 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 OR10J4P0C629 311 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 SERPINB9P50453 376 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 DYNLT3P51808 116 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 GNG3P63215 75 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 MPV17LQ2QL34 196 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 GDF5OSQ5U4N7 250 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 HACD4Q5VWC8 232 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 EXOC3-AS1Q8N2X6 119 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 FAM24BQ8N5W8 94 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 GRPEL2Q8TAA5 225 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 MAGOHBQ96A72 148 aaKnown RBP0.55□□□□□ -2.32
CHD9-211ENST00000564600 ZNF714Q96N38 554 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 ODF3Q96PU9 254 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 TP53RKQ96S44 253 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 GPX7Q96SL4 187 aaPredicted RBP0.55□□□□□ -2.32
CHD9-211ENST00000564600 AIF1LQ9BQI0 150 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 TCEAL2Q9H3H9 227 aaPredicted RBP0.55□□□□□ -2.32
CHD9-211ENST00000564600 KLK9Q9UKQ9 250 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 UTP11Q9Y3A2 253 aaKnown RBP0.55□□□□□ -2.32
CHD9-211ENST00000564600 HSPB11Q9Y547 144 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 SCN8AQ9UQD0 1980 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 FREM3P0C091 2139 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 PCLOQ9Y6V0 5065 aa0.55□□□□□ -2.32
CHD9-211ENST00000564600 ARHGEF11O15085 1522 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 MYH3P11055 1940 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 ZNF469Q96JG9 3925 aaPredicted RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 A0A096LPI6 279 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 IGKV2D-26A0A0A0MRZ7 120 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 IGLV3-32A0A0A0MS00 114 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 A0A1B0GV72 72 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 ARL5CA6NH57 179 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 RIIAD1A6NNX1 92 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 PPP5D1E7EU14 171 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 PGRMC1O00264 195 aaKnown RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 GPR31O00270 319 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 CST8O60676 142 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 TIMM17BO60830 172 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 MGST1P10620 155 aaKnown RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 OGNP20774 298 aaKnown RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 ZNF93P35789 620 aaPredicted RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 SRP9P49458 86 aaKnown RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 GTF2A1P52655 376 aaPredicted RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 DR1Q01658 176 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 CIRBPQ14011 172 aaKnown RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 RNASE10Q5GAN6 216 aaKnown RBP0.54□□□□□ -2.32
CHD9-211ENST00000564600 FAM74A1Q5RGS3 127 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 FKBP1CQ5VVH2 108 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 C1orf140Q5VVS0 124 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 C3orf33Q6P1S2 294 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 SMIM15Q7Z3B0 74 aa0.54□□□□□ -2.32
CHD9-211ENST00000564600 OR5D16Q8NGK9 328 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms