RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 TOX4O94842 621 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 ZNF25P17030 456 aaPredicted RBP13.05□□□□□ -0.32
CCNF-204ENST00000564333 TMEM11P17152 192 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 TCL1AP56279 114 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 UBE2G1P62253 170 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 NDPQ00604 133 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
CCNF-204ENST00000564333 EBI3Q14213 229 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 ASPHD1Q5U4P2 390 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 MRPL54Q6P161 138 aaKnown RBP13.05□□□□□ -0.32
CCNF-204ENST00000564333 TMEM68Q96MH6 324 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 RPH3ALQ9UNE2 315 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 SPINK4O60575 86 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 FRMD6-AS1P0C7T7 363 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 CD33P20138 364 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 TDRG1Q3Y452 100 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 ZNF562Q6V9R5 426 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 Q8N976 141 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 C5orf17Q8NAS9 161 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 TMEM14CQ9P0S9 112 aa13.05□□□□□ -0.32
CCNF-204ENST00000564333 SOX21Q9Y651 276 aaPredicted RBP13.05□□□□□ -0.32
CCNF-204ENST00000564333 H3BTX0 84 aa13.04□□□□□ -0.32
CCNF-204ENST00000564333 DLEU1O43261 78 aa13.04□□□□□ -0.32
CCNF-204ENST00000564333 OR2J3O76001 311 aa13.04□□□□□ -0.32
CCNF-204ENST00000564333 PMCHP20382 165 aa13.04□□□□□ -0.32
CCNF-204ENST00000564333 CTRLP40313 264 aa13.04□□□□□ -0.32
CCNF-204ENST00000564333 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
CCNF-204ENST00000564333 CYB5R2Q6BCY4 276 aa13.04□□□□□ -0.32
CCNF-204ENST00000564333 TSKUQ8WUA8 353 aa13.04□□□□□ -0.32
CCNF-204ENST00000564333 Q9H3A6 140 aa13.04□□□□□ -0.32
CCNF-204ENST00000564333 IGLV11-55A0A075B6I3 123 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 TOMM40O96008 361 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 LINC00614P0C842 121 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 LMO4P61968 165 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 SPATA45Q537H7 98 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 UBE2E1P51965 193 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 KIAA1644Q3SXP7 199 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 CT83Q5H943 113 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 FANCD2OSQ96PS1 177 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 PPP1R14DQ9NXH3 145 aa13.03□□□□□ -0.32
CCNF-204ENST00000564333 KMT2BQ9UMN6 2715 aaPredicted RBP13.03□□□□□ -0.32
CCNF-204ENST00000564333 H3BRN7 92 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 OVOL3O00110 214 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 G0S2P27469 103 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 SLC35B1P78383 322 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 TTC9CQ8N5M4 171 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 NUDT10Q8NFP7 164 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 C18orf32Q8TCD1 76 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 NUDT11Q96G61 164 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 RCHY1Q96PM5 261 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 TMEM208Q9BTX3 173 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 KLF12Q9Y4X4 402 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 S4R3C0 116 aa13.02□□□□□ -0.32
CCNF-204ENST00000564333 GNG7O60262 68 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 CA1P00915 261 aaPredicted RBP13.01□□□□□ -0.33
CCNF-204ENST00000564333 C3orf79P0CE67 100 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 PRR27Q6MZM9 219 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 NUP35Q8NFH5 326 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 RNF125Q96EQ8 232 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 FMC1Q96HJ9 113 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 SHANK2-AS3Q9BTD1 123 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 C7orf69Q9H7B7 122 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 GOLT1BQ9Y3E0 138 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 TRAV30A0A087WSZ9 112 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 HSBP1O75506 76 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 TCRAP04437 139 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 IL4P05112 153 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 NIT1Q86X76 327 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 ZNF48Q96MX3 618 aaPredicted RBP13.01□□□□□ -0.33
CCNF-204ENST00000564333 LPAR2Q9HBW0 351 aa13.01□□□□□ -0.33
CCNF-204ENST00000564333 SPTBN1Q01082 2364 aaKnown RBP13.01□□□□□ -0.33
CCNF-204ENST00000564333 IGHV4-39P01824 125 aa13□□□□□ -0.33
CCNF-204ENST00000564333 FAM106CPP0CH98 169 aa13□□□□□ -0.33
CCNF-204ENST00000564333 SAA4P35542 130 aa13□□□□□ -0.33
CCNF-204ENST00000564333 MFAP4P55083 255 aa13□□□□□ -0.33
CCNF-204ENST00000564333 SLAQ13239 276 aa13□□□□□ -0.33
CCNF-204ENST00000564333 ZNF491Q8N8L2 437 aa13□□□□□ -0.33
CCNF-204ENST00000564333 Q8N9W7 124 aa13□□□□□ -0.33
CCNF-204ENST00000564333 SGK494Q96LW2 274 aa13□□□□□ -0.33
CCNF-204ENST00000564333 GPR82Q96P67 336 aa13□□□□□ -0.33
CCNF-204ENST00000564333 C1RLQ9NZP8 487 aa13□□□□□ -0.33
CCNF-204ENST00000564333 IGHV7-81A0A0B4J1V7 117 aa13□□□□□ -0.33
CCNF-204ENST00000564333 IGLC2P0DOY2 106 aa13□□□□□ -0.33
CCNF-204ENST00000564333 IGLC3P0DOY3 106 aa13□□□□□ -0.33
CCNF-204ENST00000564333 FAM120AOSQ5T036 256 aa13□□□□□ -0.33
CCNF-204ENST00000564333 DMRTA1Q5VZB9 504 aa13□□□□□ -0.33
CCNF-204ENST00000564333 AJUBAQ96IF1 538 aa13□□□□□ -0.33
CCNF-204ENST00000564333 TXN2Q99757 166 aa13□□□□□ -0.33
CCNF-204ENST00000564333 ZNF492Q9P255 531 aa13□□□□□ -0.33
CCNF-204ENST00000564333 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
CCNF-204ENST00000564333 A8MWL6 223 aa12.99□□□□□ -0.33
CCNF-204ENST00000564333 HNRNPA3P51991 378 aaKnown RBP12.99□□□□□ -0.33
CCNF-204ENST00000564333 Q56UQ5 140 aa12.99□□□□□ -0.33
CCNF-204ENST00000564333 BPIFA4PQ86YQ2 179 aa12.99□□□□□ -0.33
CCNF-204ENST00000564333 FAM168AQ92567 244 aa12.99□□□□□ -0.33
CCNF-204ENST00000564333 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
CCNF-204ENST00000564333 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
CCNF-204ENST00000564333 TACC2O95359 2948 aa12.98□□□□□ -0.33
CCNF-204ENST00000564333 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms