RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 MRPL18Q9H0U6 180 aaKnown RBP14.1□□□□□ -0.15
GDE1-203ENST00000564172 GTSF1LQ9H1H1 148 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 TPSG1Q9NRR2 321 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 HIF1ANQ9NWT6 349 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 RNF223E7ERA6 249 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 CRYGBP07316 175 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 PIP4P2Q8N4L2 257 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 FAM103A1Q9BTL3 118 aaKnown RBP14.1□□□□□ -0.15
GDE1-203ENST00000564172 HINT2Q9BX68 163 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 COMMD5Q9GZQ3 224 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 C7orf69Q9H7B7 122 aa14.1□□□□□ -0.15
GDE1-203ENST00000564172 NPFFO15130 113 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 NUDT3O95989 172 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 IGKV1D-33P01593 117 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 IGKV1-33P01594 117 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 CD24P25063 80 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 PRCDQ00LT1 54 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 MRGPRG-AS1Q2M3A8 158 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 LINC01356Q8N9X3 169 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 MAPK1IP1LQ8NDC0 245 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 WNT10AQ9GZT5 417 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 ST20Q9HBF5 79 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 NPVFQ9HCQ7 196 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 C15orf62A8K5M9 175 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 PMS2P5A8MQ11 134 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 KRTAP1-3Q8IUG1 177 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 SIGLEC9Q9Y336 463 aa14.09□□□□□ -0.15
GDE1-203ENST00000564172 GCN1Q92616 2671 aaKnown RBP14.08□□□□□ -0.16
GDE1-203ENST00000564172 ZNF324O75467 553 aaPredicted RBP14.08□□□□□ -0.16
GDE1-203ENST00000564172 HLA-DRB1P01911 266 aa14.08□□□□□ -0.16
GDE1-203ENST00000564172 IGLL1P15814 213 aa14.08□□□□□ -0.16
GDE1-203ENST00000564172 HBG1P69891 147 aa14.08□□□□□ -0.16
GDE1-203ENST00000564172 HBG2P69892 147 aa14.08□□□□□ -0.16
GDE1-203ENST00000564172 OR5A1Q8NGJ0 315 aa14.08□□□□□ -0.16
GDE1-203ENST00000564172 BORCS7Q96B45 105 aa14.08□□□□□ -0.16
GDE1-203ENST00000564172 DERL1Q9BUN8 251 aa14.08□□□□□ -0.16
GDE1-203ENST00000564172 GEMIN7Q9H840 131 aaKnown RBP14.08□□□□□ -0.16
GDE1-203ENST00000564172 NDUFA4L2Q9NRX3 87 aa14.08□□□□□ -0.16
GDE1-203ENST00000564172 E7EUB6 86 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 MOSP00540 346 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 GATA3P23771 443 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 PLP1P60201 277 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 OR1L8Q8NGR8 309 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 SGMS2Q8NHU3 365 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 PLEKHA3Q9HB20 300 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 ENY2Q9NPA8 101 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 CSMD1Q96PZ7 3565 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.07□□□□□ -0.16
GDE1-203ENST00000564172 FASNP49327 2511 aaKnown RBP14.07□□□□□ -0.16
GDE1-203ENST00000564172 TRAV40A0A0B4J280 105 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 IGHV1-69DA0A0B4J2H0 117 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 MUC21A0A0G2JKD1 596 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 MUC21A0A140T8X8 626 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 A0A1W2PS18 150 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 K7EP34 96 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 K7EQM0 130 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 IGHV1-69P01742 117 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 STAG3L2P0CL84 134 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 MUC21Q5SSG8 566 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 MMD2Q8IY49 270 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 Q96MF0 132 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 SPATA25Q9BR10 227 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 CHRDL1Q9BU40 450 aa14.07□□□□□ -0.16
GDE1-203ENST00000564172 IGHV3OR16-10A0A075B7F0 116 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 CA2P00918 260 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 HES1Q14469 280 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 C10orf55Q5SWW7 151 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 PPP1R27Q86WC6 154 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 FBXL15Q9H469 300 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 RRHO14718 337 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 SSBP2P81877 361 aaPredicted RBP14.06□□□□□ -0.16
GDE1-203ENST00000564172 SLC38A11Q08AI6 406 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 EBI3Q14213 229 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 RUSC1-AS1Q66K80 236 aa14.06□□□□□ -0.16
GDE1-203ENST00000564172 GAGE12HA6NDE8 117 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 CGB1A6NKQ9 187 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 NPBQ8NG41 125 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 NPFFR1Q9GZQ6 430 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 GNB4Q9HAV0 340 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 PLXNB1O43157 2135 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 NBR2O15453 112 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 AVPP01185 164 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 IGHV4-38-2P0DP08 117 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 SEC11AP67812 179 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 TMEM249Q2WGJ8 235 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 COX19Q49B96 90 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 SCGB1C1Q8TD33 95 aa14.05□□□□□ -0.16
GDE1-203ENST00000564172 NDUFA3O95167 84 aa14.04□□□□□ -0.16
GDE1-203ENST00000564172 TGFAP01135 160 aa14.04□□□□□ -0.16
GDE1-203ENST00000564172 MT-ND6P03923 174 aa14.04□□□□□ -0.16
GDE1-203ENST00000564172 CLEC3BP05452 202 aa14.04□□□□□ -0.16
GDE1-203ENST00000564172 BRD3OSQ6XYD6 125 aa14.04□□□□□ -0.16
GDE1-203ENST00000564172 GNB1LQ9BYB4 327 aa14.04□□□□□ -0.16
GDE1-203ENST00000564172 WDR61Q9GZS3 305 aaKnown RBP14.04□□□□□ -0.16
GDE1-203ENST00000564172 PRRC2AP48634 2157 aaKnown RBP14.03□□□□□ -0.16
GDE1-203ENST00000564172 PSMB11A5LHX3 300 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 INS-IGF2F8WCM5 200 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 FCN1O00602 326 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 ACTL6BO94805 426 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 NPY1RP25929 384 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms