RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 KIAA0087Q14695 138 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 MMDQ15546 238 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 ZNF660Q6AZW8 331 aaPredicted RBP3.29□□□□□ -1.88
LINC00254-201ENST00000563416 C10orf99Q6UWK7 81 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 CBLN2Q8IUK8 224 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 STPG2Q8N412 459 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 C14orf178Q8N769 122 aaPredicted RBP3.29□□□□□ -1.88
LINC00254-201ENST00000563416 OR4X2Q8NGF9 303 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 MYOZ3Q8TDC0 251 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 ARPC1AQ92747 370 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 ISOC1Q96CN7 298 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 ADTRPQ96IZ2 230 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 TSNAXQ99598 290 aaKnown RBP3.29□□□□□ -1.88
LINC00254-201ENST00000563416 RASL11BQ9BPW5 248 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 SLIRPQ9GZT3 109 aaKnown RBP3.29□□□□□ -1.88
LINC00254-201ENST00000563416 NXF2Q9GZY0 626 aaKnown RBP3.29□□□□□ -1.88
LINC00254-201ENST00000563416 MIXL1Q9H2W2 232 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 NECAP2Q9NVZ3 263 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 COMMD3Q9UBI1 195 aa3.29□□□□□ -1.88
LINC00254-201ENST00000563416 COL7A1Q02388 2944 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 TGP01266 2768 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 SMIM31A0A1B0GVY4 71 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 MEIS3P1A6NDR6 274 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 H7C2Y5 167 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 OR5H8P0DN80 308 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 PSMB8P28062 276 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 SLC6A1P30531 599 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 PRSS3P35030 304 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 RCVRNP35243 200 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 LGALS7P47929 136 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 TAS2R46P59540 309 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 RPL30P62888 115 aaKnown RBP3.28□□□□□ -1.88
LINC00254-201ENST00000563416 CDK10Q15131 360 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 PSG5Q15238 335 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 RTL8BQ17RB0 113 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 CASC10Q5T4H9 136 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 OR10G9Q8NGN4 311 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 OR2G3Q8NGZ4 309 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 FLYWCH2Q96CP2 140 aaKnown RBP3.28□□□□□ -1.88
LINC00254-201ENST00000563416 HSD17B10Q99714 261 aaKnown RBP3.28□□□□□ -1.88
LINC00254-201ENST00000563416 FXYD6Q9H0Q3 95 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 FBXL15Q9H469 300 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 IFT46Q9NQC8 304 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 LINC00527Q9UJ94 153 aa3.28□□□□□ -1.88
LINC00254-201ENST00000563416 RBM7Q9Y580 266 aaKnown RBP3.28□□□□□ -1.88
LINC00254-201ENST00000563416 TSSC4Q9Y5U2 329 aaPredicted RBP3.28□□□□□ -1.88
LINC00254-201ENST00000563416 HUWE1Q7Z6Z7 4374 aaKnown RBP3.27□□□□□ -1.89
LINC00254-201ENST00000563416 A0A1B0GW15 77 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 WI2-2373I1.2A0A1W2PRP0 233 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 FAM25AB3EWG3 89 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 FAM25CB3EWG5 89 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 FAM25GB3EWG6 89 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 G3V318 75 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 GABARAPH6UMI1 98 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 RTL8CO15255 209 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 RBFOX2O43251 390 aaKnown RBP eCLIP3.27□□□□□ -1.89
LINC00254-201ENST00000563416 GATCO43716 136 aaKnown RBP3.27□□□□□ -1.89
LINC00254-201ENST00000563416 BRI3O95415 125 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 CRYZL1O95825 349 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 CA2P00918 260 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 SAA1P0DJI8 122 aaPredicted RBP3.27□□□□□ -1.89
LINC00254-201ENST00000563416 HRH1P35367 487 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 UBE2KP61086 200 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 MRPS10P82664 201 aaKnown RBP3.27□□□□□ -1.89
LINC00254-201ENST00000563416 SSBP1Q04837 148 aaKnown RBP3.27□□□□□ -1.89
LINC00254-201ENST00000563416 TNXAQ16473 311 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 POU2AF1Q16633 256 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 AKIRIN2Q53H80 203 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 ACTBL2Q562R1 376 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 COA6Q5JTJ3 125 aaKnown RBP3.27□□□□□ -1.89
LINC00254-201ENST00000563416 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 ZNF818PQ6ZRF7 136 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 LHFPL1Q86WI0 220 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 SNX29P2Q8IUI4 249 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 TCTEX1D1Q8N7M0 179 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 LINC00469Q8N7U9 141 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 WFDC9Q8NEX5 89 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 OR6Q1Q8NGQ2 317 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 OR5H2Q8NGV7 314 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 OR4S2Q8NH73 311 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 C15orf40Q8WUR7 153 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 SMIM4Q8WVI0 70 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 BORCS5Q969J3 196 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 CCL28Q9NRJ3 127 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 METTL1Q9UBP6 276 aaKnown RBP3.27□□□□□ -1.89
LINC00254-201ENST00000563416 MTFP1Q9UDX5 166 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 NUBP2Q9Y5Y2 271 aa3.27□□□□□ -1.89
LINC00254-201ENST00000563416 TRAV41A0A0B4J266 112 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 TCRBV4S1A1TA0A5B7 111 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 SEC14L6B5MCN3 397 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 J3QRK9 145 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 RGS5O15539 181 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 GSTZ1O43708 216 aaPredicted RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 CREBL2O60519 120 aaPredicted RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 OXTP01178 125 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 GCGP01275 180 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 PMP2P02689 132 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 CD74P04233 296 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 HSPB1P04792 205 aaKnown RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 CHTF8P0CG12 524 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms