RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 AP4S1Q9Y587 144 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 MED14O60244 1454 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 NCAPD3P42695 1498 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 GAPVD1Q14C86 1478 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 MAP3K1Q13233 1512 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 SMARCA4P51532 1647 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 TRBV19A0A075B6N1 114 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 A0A1B0GW64 132 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM235A6NFC5 223 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 J3QRK9 145 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 NPFFO15130 113 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 DENND4BO75064 1496 aaPredicted RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 LYZL6O75951 148 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF682O95780 498 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 NPYP01303 97 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 SRP19P09132 144 aaKnown RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 LGALS3P17931 250 aaKnown RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 PEBP1P30086 187 aaKnown RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF93P35789 620 aaPredicted RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 UBA52P62987 128 aaKnown RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 EIF3IQ13347 325 aaKnown RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 TCOF1Q13428 1488 aaKnown RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 RTL8BQ17RB0 113 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 GREB1Q4ZG55 1949 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 PYY3Q5JQD4 70 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 MEIG1Q5JSS6 88 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 GLYATL3Q5SZD4 288 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM244Q5VVB8 128 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 Q6Q795 121 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF720Q7Z2F6 126 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 LHFPL1Q86WI0 220 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 TEX14Q8IWB6 1497 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 EXOC3-AS1Q8N2X6 119 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 SVBPQ8N300 66 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 OR4S1Q8NGB4 309 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 BORCS8Q96FH0 119 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 TSPAN32Q96QS1 320 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 OR4C12Q96R67 309 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 S100A13Q99584 98 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 SLC25A21Q9BQT8 299 aaPredicted RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 RTL8AQ9BWD3 113 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM191AQ9H0A3 160 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 C11orf68Q9H3H3 251 aaKnown RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 RNF122Q9H9V4 155 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 KIAA1551Q9HCM1 1747 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 BET1LQ9NYM9 111 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 CCDC167Q9P0B6 97 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 COMMD3Q9UBI1 195 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 CKLFQ9UBR5 152 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 PCTPQ9UKL6 214 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 FUT9Q9Y231 359 aa1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 KLK5Q9Y337 293 aaPredicted RBP1.53□□□□□ -2.16
SHCBP1-202ENST00000563219 SCN10AQ9Y5Y9 1956 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 MYH2Q9UKX2 1941 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 PHIPQ8WWQ0 1821 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 THOC2Q8NI27 1593 aaKnown RBP1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 DCCP43146 1447 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 DAPK1P53355 1430 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 TRAV9-1A0A075B6T8 112 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 IGKV1D-43A0A0B4J1Z2 117 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 C7orf71A4D174 169 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 ZNF670-ZNF695F2Z2N8 137 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 J3QRE1 110 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 CDC42EP2O14613 210 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 NCR2O95944 276 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 APOC3P02656 99 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 MT-ND4LP03901 98 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 CD14P08571 375 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 SPINK8P0C7L1 97 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 LINC00032P0C843 101 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 IGLC6P0CF74 106 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 LINC00694P0DN24 101 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 SDC2P34741 201 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 FKBP1AP62942 108 aaKnown RBP1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 DEFA5Q01523 94 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 SLC38A11Q08AI6 406 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 MSMO1Q15800 293 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 IQCJQ1A5X6 159 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 VMA21Q3ZAQ7 101 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 LCN15Q6UWW0 184 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 BPIFA4PQ86YQ2 179 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 C5orf17Q8NAS9 161 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 OR5D14Q8NGL3 314 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 PSMF1Q92530 271 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 LINC00052Q96N35 136 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 VAMP8Q9BV40 100 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 DPY30Q9C005 99 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 FKBP11Q9NYL4 201 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 IL36BQ9NZH7 164 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 TP73-AS1Q9UF72 201 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 NOP16Q9Y3C1 178 aaKnown RBP1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 HEATR5AQ86XA9 2040 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 KIF13BQ9NQT8 1826 aa1.52□□□□□ -2.17
SHCBP1-202ENST00000563219 ABCA10Q8WWZ4 1543 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 KDM5DQ9BY66 1539 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 PZPP20742 1482 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TECPR2O15040 1411 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 TRAPPC8Q9Y2L5 1435 aa1.51□□□□□ -2.17
SHCBP1-202ENST00000563219 MPDZO75970 2070 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms