RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
COMMD4-205ENST00000562310 ADCYAP1P18509 176 aa11□□□□□ -0.65
COMMD4-205ENST00000562310 C1orf194Q5T5A4 169 aa11□□□□□ -0.65
COMMD4-205ENST00000562310 CYB561D1Q8N8Q1 229 aa11□□□□□ -0.65
COMMD4-205ENST00000562310 YTHDF2Q9Y5A9 579 aaKnown RBP11□□□□□ -0.65
COMMD4-205ENST00000562310 NF1P21359 2839 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 ZFHX3Q15911 3703 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 APOC3P02656 99 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 NPPCP23582 126 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 ATP5G3P48201 142 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 FAM106AQ4KMX7 169 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 LEMD1Q68G75 181 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 SVBPQ8N300 66 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 WIPF2Q8TF74 440 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-205ENST00000562310 MTORP42345 2549 aa10.99□□□□□ -0.65
COMMD4-205ENST00000562310 CLPSL1A2RUU4 121 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 CRYBB3P26998 211 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 CDX1P47902 265 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-205ENST00000562310 PDE6HQ13956 83 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 FAM74A3Q4VXF1 159 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 GPHB5Q86YW7 130 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 C4orf3Q8WVX3 66 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 C11orf52Q96A22 123 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 C20orf24Q9BUV8 137 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 U3KQE9 123 aa10.98□□□□□ -0.65
COMMD4-205ENST00000562310 MRPS12O15235 138 aaKnown RBP10.97□□□□□ -0.65
COMMD4-205ENST00000562310 IGLC2P0DOY2 106 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 CEBPGP53567 150 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 RPEL1Q2QD12 228 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 FAM90A2PQ658T7 463 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 OR8I2Q8N0Y5 310 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 LINC01006Q8NI28 216 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 RPUSD4Q96CM3 377 aaKnown RBP10.97□□□□□ -0.65
COMMD4-205ENST00000562310 GRAMD2BQ96HH9 432 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 OR5B12Q96R08 314 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 UFC1Q9Y3C8 167 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 FBN3Q75N90 2809 aa10.97□□□□□ -0.65
COMMD4-205ENST00000562310 HIVEP1P15822 2718 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 NSD1Q96L73 2696 aaPredicted RBP10.96□□□□□ -0.65
COMMD4-205ENST00000562310 A0A1W2PS18 150 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 GGTLC3B5MD39 225 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 K7EMT4 169 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 BUB3O43684 328 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 SNAPINO95295 136 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 ATF4P18848 351 aaPredicted RBP10.96□□□□□ -0.65
COMMD4-205ENST00000562310 BMI1P35226 326 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 GALR1P47211 349 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 MEOX2P50222 304 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 REC114Q7Z4M0 266 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 CCDC28AQ8IWP9 274 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 LYPD1Q8N2G4 141 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 BLNKQ8WV28 456 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 NIPSNAP3BQ9BS92 247 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 ELOVL1Q9BW60 279 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.65
COMMD4-205ENST00000562310 OTORQ9NRC9 128 aa10.96□□□□□ -0.65
COMMD4-205ENST00000562310 TRBV19A0A075B6N1 114 aa10.95□□□□□ -0.66
COMMD4-205ENST00000562310 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
COMMD4-205ENST00000562310 A0A087X0K7 114 aa10.95□□□□□ -0.66
COMMD4-205ENST00000562310 ZNF253O75346 499 aa10.95□□□□□ -0.66
COMMD4-205ENST00000562310 KHDC1LQ5JSQ8 128 aa10.95□□□□□ -0.66
COMMD4-205ENST00000562310 UNQ9165/PRO28630Q6UXU0 137 aa10.95□□□□□ -0.66
COMMD4-205ENST00000562310 SMIM7Q9BQ49 75 aa10.95□□□□□ -0.66
COMMD4-205ENST00000562310 ZNF586Q9NXT0 402 aa10.95□□□□□ -0.66
COMMD4-205ENST00000562310 A0A1B0GUS0 222 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 SCO2A0A1W2PP80 73 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 ZNF320A2RRD8 509 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 ZNF727A8MUV8 499 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 A8MWP6 167 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 H3BQ15 152 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 LGALS9O00182 355 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 MYCNOSP40205 109 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 SUMO1P63165 101 aaKnown RBP10.94□□□□□ -0.66
COMMD4-205ENST00000562310 PSG9Q00887 426 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 PNRC1Q12796 327 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-205ENST00000562310 GUCA2BQ16661 112 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 TCTEX1D4Q5JR98 221 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 C1QL4Q86Z23 238 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 PARLQ9H300 379 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 Q9H3A6 140 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 RNF114Q9Y508 228 aa10.94□□□□□ -0.66
COMMD4-205ENST00000562310 IGHV4OR15-8A0A075B7B6 117 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 A0A087WW49 117 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 IGHV7-4-1A0A0J9YVY3 117 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 ZNF207O43670 478 aaKnown RBP10.93□□□□□ -0.66
COMMD4-205ENST00000562310 RANP62826 216 aaKnown RBP10.93□□□□□ -0.66
COMMD4-205ENST00000562310 C16orf54Q6UWD8 224 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 KLHL30-AS1Q8NEE0 82 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 HIST1H2BAQ96A08 127 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 TVP23CQ96ET8 276 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 NAT8Q9UHE5 227 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 DNHD1Q96M86 4753 aa10.93□□□□□ -0.66
COMMD4-205ENST00000562310 ANK3Q12955 4377 aaKnown RBP10.93□□□□□ -0.66
COMMD4-205ENST00000562310 LINC01619G3V211 115 aa10.92□□□□□ -0.66
COMMD4-205ENST00000562310 NDUFB4O95168 129 aa10.92□□□□□ -0.66
COMMD4-205ENST00000562310 SLC25A5P05141 298 aaKnown RBP10.92□□□□□ -0.66
COMMD4-205ENST00000562310 HOXD3P31249 432 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms