RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 UQCC2Q9BRT2 126 aa3.61□□□□□ -1.83
UBR1-203ENST00000562173 C6orf62Q9GZU0 229 aaPredicted RBP3.61□□□□□ -1.83
UBR1-203ENST00000562173 NXF2Q9GZY0 626 aaKnown RBP3.61□□□□□ -1.83
UBR1-203ENST00000562173 Q9HAA7 133 aa3.61□□□□□ -1.83
UBR1-203ENST00000562173 PRR34Q9NV39 138 aa3.61□□□□□ -1.83
UBR1-203ENST00000562173 CKLFQ9UBR5 152 aa3.61□□□□□ -1.83
UBR1-203ENST00000562173 LRRC42Q9Y546 428 aa3.61□□□□□ -1.83
UBR1-203ENST00000562173 TMEM235A6NFC5 223 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 SLC17A2O00624 439 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 DENRO43583 198 aaKnown RBP3.6□□□□□ -1.83
UBR1-203ENST00000562173 CIB2O75838 187 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 IGKV1-39P01597 117 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 IGKV1D-39P04432 117 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 SNRPCP09234 159 aaKnown RBP3.6□□□□□ -1.83
UBR1-203ENST00000562173 TRAPPC2P0DI81 140 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 TRAPPC2BP0DI82 140 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 DAD1P61803 113 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 ST3GAL4Q11206 333 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 WFDC2Q14508 124 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 ARRDC1Q8N5I2 433 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 OR4S2Q8NH73 311 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 IL22RA2Q969J5 263 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 PARD6GQ9BYG4 376 aaPredicted RBP3.6□□□□□ -1.83
UBR1-203ENST00000562173 PLGRKTQ9HBL7 147 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 NDUFA4L2Q9NRX3 87 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 BET1LQ9NYM9 111 aa3.6□□□□□ -1.83
UBR1-203ENST00000562173 LSM2Q9Y333 95 aaKnown RBP3.6□□□□□ -1.83
UBR1-203ENST00000562173 TRAV12-2A0A075B6T6 113 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 A0A096LPF7 62 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 CCNKO75909 580 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 TMEM50AO95807 157 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 HIST1H1DP16402 221 aaKnown RBP3.59□□□□□ -1.83
UBR1-203ENST00000562173 ID1P41134 155 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 LPAR6P43657 344 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 USF2Q15853 346 aaPredicted RBP3.59□□□□□ -1.83
UBR1-203ENST00000562173 RAB11BQ15907 218 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 Q1RN00 199 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 HSD17B12Q53GQ0 312 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 C1orf146Q5VVC0 180 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 LIPKQ5VXJ0 399 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 GLT8D1Q68CQ7 371 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 TMPRSS11AQ6ZMR5 421 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 TMEM17Q86X19 198 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 BAP18Q8IXM2 172 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 OR4B1Q8NGF8 309 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 OR10R2Q8NGX6 335 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 RAB3CQ96E17 227 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 TMEM80Q96HE8 168 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 ADTRPQ96IZ2 230 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 CHTOPQ9Y3Y2 248 aaKnown RBP3.59□□□□□ -1.83
UBR1-203ENST00000562173 OR51B2Q9Y5P1 312 aa3.59□□□□□ -1.83
UBR1-203ENST00000562173 A0A087WTM6 91 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 A0A0G2JRQ6 117 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 FAM240BA0A1B0GVZ2 78 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 HELTA6NFD8 242 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 ERICH4A6NGS2 130 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 M0R2Z0 102 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 CRXO43186 299 aaPredicted RBP3.58□□□□□ -1.84
UBR1-203ENST00000562173 GNG7O60262 68 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 KRASP01116 189 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 CDK1P06493 297 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 UCHL1P09936 223 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 NPY1RP25929 384 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 DCKP27707 260 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 MAP2K4P45985 399 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 FABP5Q01469 135 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 OR13F1Q8NGS4 319 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 OR5H6Q8NGV6 325 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 GPR146Q96CH1 333 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 LINC00052Q96N35 136 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 FUNDC2Q9BWH2 189 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 COMMD5Q9GZQ3 224 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 FXYD6Q9H0Q3 95 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 DCSTAMPQ9H295 470 aa3.58□□□□□ -1.84
UBR1-203ENST00000562173 TRAV26-1A0A087WT03 109 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 PCP4L1A6NKN8 68 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 IGKV1-17P01599 117 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 UBBP0CG47 229 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 HLA-DRB4P13762 266 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 MYL12AP19105 171 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 SERPINB10P48595 397 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 WNT4P56705 351 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 HERV-K104P63124 156 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 TPBGQ13641 420 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 RCN1Q15293 331 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 POU2AF1Q16633 256 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 SPINK13Q1W4C9 94 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 CDNFQ49AH0 187 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 DNAL1Q4LDG9 190 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 FAM78BQ5VT40 261 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 AMTNQ6UX39 209 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 BPIFB6Q8NFQ5 453 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 TYMSOSQ8TAI1 123 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 CYGBQ8WWM9 190 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 PHYHIPQ92561 330 aa3.57□□□□□ -1.84
UBR1-203ENST00000562173 MRPL53Q96EL3 112 aaKnown RBP3.57□□□□□ -1.84
UBR1-203ENST00000562173 MRPL48Q96GC5 212 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms