RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 RHOGP84095 191 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 HIST1H1AQ02539 215 aaPredicted RBP11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 PRB3Q04118 309 aaPredicted RBP11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 FA2HQ7L5A8 372 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 C8orf31Q8N9H6 132 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 DEFB124Q8NES8 71 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 CTSZQ9UBR2 303 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 CEP250Q9BV73 2442 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 LOXP28300 417 aaPredicted RBP11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 LDLRAD2Q5SZI1 272 aa11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 NEU4Q8WWR8 484 aaPredicted RBP11.12□□□□□ -0.63
VPS9D1-202ENST00000561976 IGLV2-11P01706 119 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 IGHV1-8P0DP01 117 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 GPR183P32249 361 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 DLX1P56177 255 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 ZC2HC1AQ96GY0 325 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 F11RQ9Y624 299 aaKnown RBP11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 FTH1P19P0C7X4 201 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 LINC01545Q5VT33 79 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 SIGLEC9Q9Y336 463 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 CHTOPQ9Y3Y2 248 aaKnown RBP11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 IGLC1P0CG04 106 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 CSN1S1P47710 185 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 PVRIGQ6DKI7 326 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 VPS25Q9BRG1 176 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 CST9LQ9H4G1 147 aa11.11□□□□□ -0.63
VPS9D1-202ENST00000561976 CD5LO43866 347 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 BSPH1Q075Z2 132 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 TMEM155Q4W5P6 130 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 ASCL5Q7RTU5 278 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 OR10AG1Q8NH19 301 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 TMEM133Q9H2Q1 129 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 INSIG2Q9Y5U4 225 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 PKDREJQ9NTG1 2253 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 CIDEAO60543 219 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 DLX6P56179 175 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 PSG9Q00887 426 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 PPP1R27Q86WC6 154 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 C17orf77Q96MU5 243 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 ZNF747Q9BV97 191 aa11.1□□□□□ -0.63
VPS9D1-202ENST00000561976 SERTM2A0A1B0GWG4 89 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 K7EQM0 130 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 PLGLAQ15195 96 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 FBXL15Q9H469 300 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 LOC389332A0A1B0GUA5 103 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 C16orf97H3BN30 126 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 NCR2O95944 276 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 COX8AP10176 69 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 S100A7P31151 101 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 OR8A1Q8NGG7 326 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 SCNM1Q9BWG6 230 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 NGBQ9NPG2 151 aa11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 SMG1Q96Q15 3661 aaKnown RBP11.09□□□□□ -0.63
VPS9D1-202ENST00000561976 CEACAM4O75871 244 aa11.08□□□□□ -0.64
VPS9D1-202ENST00000561976 OCIAD2Q56VL3 154 aa11.08□□□□□ -0.64
VPS9D1-202ENST00000561976 PSG8Q9UQ74 426 aa11.08□□□□□ -0.64
VPS9D1-202ENST00000561976 TEX22C9J3V5 150 aa11.08□□□□□ -0.64
VPS9D1-202ENST00000561976 SMIM15Q7Z3B0 74 aa11.08□□□□□ -0.64
VPS9D1-202ENST00000561976 PRSS33Q8NF86 280 aa11.08□□□□□ -0.64
VPS9D1-202ENST00000561976 DYNLRB1Q9NP97 96 aa11.08□□□□□ -0.64
VPS9D1-202ENST00000561976 PEF1Q9UBV8 284 aaKnown RBP11.08□□□□□ -0.64
VPS9D1-202ENST00000561976 BDP1A6H8Y1 2624 aa11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 TRAV8-6A0A0B4J262 113 aa11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 ZNF785A8K8V0 405 aa11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 CRYGBP07316 175 aa11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 RPS20P60866 119 aaKnown RBP11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 C7orf71A4D174 169 aa11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 TNFRSF13BO14836 293 aaPredicted RBP11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 FOXE3Q13461 319 aa11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 TMEM75Q8N9X5 138 aa11.07□□□□□ -0.64
VPS9D1-202ENST00000561976 TMSB15BA0A087X1C1 80 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 IGHV1-3A0A0C4DH29 117 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 OVOL3O00110 214 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 CNIH1O95406 144 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 FAM106CPP0CH98 169 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 HOXB4P17483 251 aaPredicted RBP11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 UQCRFS1P47985 274 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 NHLH1Q02575 133 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 RBPJQ06330 500 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 FAM106AQ4KMX7 169 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 C2orf91Q6ZV80 131 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 A0A1B0GW15 77 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 I3L2K1 104 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 KLK10O43240 276 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 CT45A10P0DMU9 189 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 TCTAP57738 103 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 PSG3Q16557 428 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 FAM57AQ8TBR7 257 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 SH3BGRL2Q9UJC5 107 aa11.06□□□□□ -0.64
VPS9D1-202ENST00000561976 TRBV6-1A0A0K0K1D8 114 aa11.05□□□□□ -0.64
VPS9D1-202ENST00000561976 GAGE12BA1L429 117 aa11.05□□□□□ -0.64
VPS9D1-202ENST00000561976 VSTM5A8MXK1 200 aa11.05□□□□□ -0.64
VPS9D1-202ENST00000561976 IGKV1-17P01599 117 aa11.05□□□□□ -0.64
VPS9D1-202ENST00000561976 COX7A1P24310 79 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms