RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 DKK4Q9UBT3 224 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 TMEM30CPA0ZSE6 113 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 SRSF1Q07955 248 aaKnown RBP eCLIP15.01□□□□□ -0.01
RAB40C-206ENST00000561781 FOXF2Q12947 444 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 PCOLCEQ15113 449 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 DEFB109BQ30KR1 87 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 AMTNQ6UX39 209 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 WDR86Q86TI4 376 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 ZNF329Q86UD4 541 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 TMEM178AQ8NBL3 297 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 ZNF414Q96IQ9 312 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 PRELID3AQ96N28 172 aa15.01□□□□□ -0.01
RAB40C-206ENST00000561781 RELNP78509 3460 aa15□□□□□ -0.01
RAB40C-206ENST00000561781 IGHV1-45A0A0A0MS14 117 aa15□□□□□ -0.01
RAB40C-206ENST00000561781 TCF19Q9Y242 345 aa15□□□□□ -0.01
RAB40C-206ENST00000561781 OOEPA6NGQ2 149 aa15□□□□□ -0.01
RAB40C-206ENST00000561781 ERVK-16P61578 105 aa15□□□□□ -0.01
RAB40C-206ENST00000561781 OR1C1Q15619 314 aa15□□□□□ -0.01
RAB40C-206ENST00000561781 ZNF562Q6V9R5 426 aa15□□□□□ -0.01
RAB40C-206ENST00000561781 FREM1Q5H8C1 2179 aa14.99□□□□□ -0.01
RAB40C-206ENST00000561781 FOXG1P55316 489 aaPredicted RBP14.99□□□□□ -0.01
RAB40C-206ENST00000561781 SRYQ05066 204 aa14.99□□□□□ -0.01
RAB40C-206ENST00000561781 OR9G1Q8NH87 305 aa14.99□□□□□ -0.01
RAB40C-206ENST00000561781 FAM234AQ9H0X4 552 aa14.99□□□□□ -0.01
RAB40C-206ENST00000561781 SPANXA1Q9NS26 97 aa14.99□□□□□ -0.01
RAB40C-206ENST00000561781 ZNF492Q9P255 531 aa14.99□□□□□ -0.01
RAB40C-206ENST00000561781 GAGE12JA6NER3 117 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 GAGE7O76087 117 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 SP1P08047 785 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 GAGE12FP0CL80 117 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 GAGE12GP0CL81 117 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 GAGE12IP0CL82 117 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 GAGE4Q13068 117 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 ABHD17BQ5VST6 288 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 Q8IYB0 196 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 C3AR1Q16581 482 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 YAE1D1Q9NRH1 226 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 CACNA1BQ00975 2339 aa14.98□□□□□ -0.01
RAB40C-206ENST00000561781 A0A096LNJ9 63 aa14.97□□□□□ -0.01
RAB40C-206ENST00000561781 PRSS29PA6NIE9 313 aa14.97□□□□□ -0.01
RAB40C-206ENST00000561781 SRRM4A7MD48 611 aaKnown RBP14.97□□□□□ -0.01
RAB40C-206ENST00000561781 FHL3Q13643 280 aa14.97□□□□□ -0.01
RAB40C-206ENST00000561781 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-206ENST00000561781 RFESDQ8TAC1 157 aa14.97□□□□□ -0.01
RAB40C-206ENST00000561781 FAM167A-AS1Q96KT0 104 aa14.97□□□□□ -0.01
RAB40C-206ENST00000561781 SLC25A2Q9BXI2 301 aa14.97□□□□□ -0.01
RAB40C-206ENST00000561781 ENY2Q9NPA8 101 aa14.97□□□□□ -0.01
RAB40C-206ENST00000561781 PROP1O75360 226 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 MRPL33O75394 65 aaKnown RBP14.96□□□□□ -0.01
RAB40C-206ENST00000561781 LTAP01374 205 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 RRN3P1Q2M238 152 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 DAZAP1Q96EP5 407 aaKnown RBP14.96□□□□□ -0.01
RAB40C-206ENST00000561781 TMEM133Q9H2Q1 129 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 POLDIP2Q9Y2S7 368 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 DOCK10Q96BY6 2186 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 C19orf71A6NCJ1 209 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 NHLRC4P0CG21 123 aaPredicted RBP14.96□□□□□ -0.01
RAB40C-206ENST00000561781 PLGLB1Q02325 96 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 C12orf74Q32Q52 190 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 MLST8Q9BVC4 326 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 RTL8AQ9BWD3 113 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 TMEM140Q9NV12 185 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 SSUH2Q9Y2M2 353 aa14.96□□□□□ -0.01
RAB40C-206ENST00000561781 TAL2Q16559 108 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 MOB3BQ86TA1 216 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 OR5AN1Q8NGI8 311 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 COQ2Q96H96 371 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 IMMP1LQ96LU5 166 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 TLN1Q9Y490 2541 aaKnown RBP14.95□□□□□ -0.02
RAB40C-206ENST00000561781 IGKV1OR2-108A0A075B7D4 117 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 SSR4P51571 173 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 CCL11P51671 97 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 KLF13Q9Y2Y9 288 aaPredicted RBP14.95□□□□□ -0.02
RAB40C-206ENST00000561781 KLF12Q9Y4X4 402 aa14.95□□□□□ -0.02
RAB40C-206ENST00000561781 TRBV25-1A0A075B6N4 114 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 TRAV5A0A0B4J249 113 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 NPIPB5A8MRT5 1133 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 FABP5P3A8MUU1 101 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 SHISA9B4DS77 424 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 K7ENP7 123 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 HOXA4Q00056 320 aaPredicted RBP14.94□□□□□ -0.02
RAB40C-206ENST00000561781 CFAP126Q5VTH2 177 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 FAM90A27PA6NNH2 459 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 TFF1P04155 84 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 NFE4Q86UQ8 179 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 IFI27L1Q96BM0 104 aa14.94□□□□□ -0.02
RAB40C-206ENST00000561781 HBDP02042 147 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 PPIFP30405 207 aaKnown RBP14.93□□□□□ -0.02
RAB40C-206ENST00000561781 CFHR2P36980 270 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 MORN5Q5VZ52 161 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 LINC00322Q6ZN03 302 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-206ENST00000561781 PAXXQ9BUH6 204 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 K7EM74 188 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 RFPL3SP0C7P2 107 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 SRD5A1P18405 259 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 IFI27P40305 119 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-206ENST00000561781 MOGAT3Q86VF5 341 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 GLMPQ8WWB7 406 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 PPDPFLQ8WWR9 84 aa14.93□□□□□ -0.02
RAB40C-206ENST00000561781 EPDR1Q9UM22 224 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms