RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 LRTM2Q8N967 370 aa8.26□□□□□ -1.09
USP3-220ENST00000561381 C7orf50Q9BRJ6 194 aaKnown RBP8.26□□□□□ -1.09
USP3-220ENST00000561381 RSG1Q9BU20 258 aa8.26□□□□□ -1.09
USP3-220ENST00000561381 GOLT1BQ9Y3E0 138 aa8.26□□□□□ -1.09
USP3-220ENST00000561381 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
USP3-220ENST00000561381 A8MTW9 85 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 H3BP45 60 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 SYNGR2O43760 224 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 MED6O75586 246 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 SFT2D2O95562 160 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 HBE1P02100 147 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 HOXB5P09067 269 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 ORM2P19652 201 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 GALR1P47211 349 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 LGALS9BQ3B8N2 356 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 SPANXN5Q5MJ07 72 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 GGNBP1Q5YKI7 109 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 UBE2DNLQ8IWF7 75 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 RPRMQ9NS64 109 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 DOK5Q9P104 306 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 V9GYH0 126 aa8.25□□□□□ -1.09
USP3-220ENST00000561381 DNAH11Q96DT5 4516 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 PIGBOS1A0A0B4J2F0 54 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 NOL3O60936 208 aaKnown RBP8.24□□□□□ -1.09
USP3-220ENST00000561381 IFNA21P01568 189 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 AP3S2P59780 193 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 RRN3P1Q2M238 152 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 TMEM88Q6PEY1 159 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 ACOT7LQ6ZUV0 252 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 OR1B1Q8NGR6 318 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 FAM210BQ96KR6 192 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 CIB3Q96Q77 187 aaPredicted RBP8.24□□□□□ -1.09
USP3-220ENST00000561381 TMED3Q9Y3Q3 217 aa8.24□□□□□ -1.09
USP3-220ENST00000561381 NACAE9PAV3 2078 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 TRAV8-2A0A0B4J237 113 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 TEX48A0A1B0GUV7 120 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 ZNF705GA8MUZ8 300 aaPredicted RBP8.23□□□□□ -1.09
USP3-220ENST00000561381 M0R2Z0 102 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 CRXO43186 299 aaPredicted RBP8.23□□□□□ -1.09
USP3-220ENST00000561381 CFDP00746 253 aaPredicted RBP8.23□□□□□ -1.09
USP3-220ENST00000561381 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
USP3-220ENST00000561381 MEOX2P50222 304 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
USP3-220ENST00000561381 RPP30P78346 268 aaKnown RBP8.23□□□□□ -1.09
USP3-220ENST00000561381 AKR1C1Q04828 323 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 OXA1LQ15070 435 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 SPINK13Q1W4C9 94 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 SAMD13Q5VXD3 122 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 Q6ZR54 194 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 BPIFCQ8NFQ6 507 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 IGF2BP2-AS1Q96M15 143 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 SLC25A21Q9BQT8 299 aaPredicted RBP8.23□□□□□ -1.09
USP3-220ENST00000561381 TMEM147Q9BVK8 224 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 SLC45A2Q9UMX9 530 aa8.23□□□□□ -1.09
USP3-220ENST00000561381 ADAP1O75689 374 aa8.22□□□□□ -1.09
USP3-220ENST00000561381 DAD1P61803 113 aa8.22□□□□□ -1.09
USP3-220ENST00000561381 POLR2GP62487 172 aaKnown RBP eCLIP8.22□□□□□ -1.09
USP3-220ENST00000561381 FGL1Q08830 312 aa8.22□□□□□ -1.09
USP3-220ENST00000561381 BAP18Q8IXM2 172 aa8.22□□□□□ -1.09
USP3-220ENST00000561381 OR11H7Q8NGC8 314 aa8.22□□□□□ -1.09
USP3-220ENST00000561381 OR4D5Q8NGN0 318 aa8.22□□□□□ -1.09
USP3-220ENST00000561381 TMEM208Q9BTX3 173 aa8.22□□□□□ -1.09
USP3-220ENST00000561381 STRAPQ9Y3F4 350 aaKnown RBP8.22□□□□□ -1.09
USP3-220ENST00000561381 MUC4Q99102 2169 aa8.21□□□□□ -1.09
USP3-220ENST00000561381 TRAV12-2A0A075B6T6 113 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 SMCO3A2RU48 225 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 A6NHS1 94 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 H3BRN7 92 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 CCNKO75909 580 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 MED14OSP0DP75 135 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 ID3Q02535 119 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 CYP2G1PQ6ZSU1 146 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 TMEM144Q7Z5S9 345 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 UHRF2Q96PU4 802 aa8.21□□□□□ -1.1
USP3-220ENST00000561381 SLC25A39Q9BZJ4 359 aaPredicted RBP8.21□□□□□ -1.1
USP3-220ENST00000561381 PKD1P98161 4303 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 PLAC8L1A1L4L8 177 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 C9orf170A2RU37 121 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 PMS2P5A8MQ11 134 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 PAX4O43316 350 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 DUSP14O95147 198 aaKnown RBP8.2□□□□□ -1.1
USP3-220ENST00000561381 INSP01308 110 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 IL5P05113 134 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 AZU1P20160 251 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 FCN2Q15485 313 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 RNF212Q495C1 297 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 CCDC190Q86UF4 302 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 ZNF738Q8NE65 137 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 GPR82Q96P67 336 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 SHANK2-AS3Q9BTD1 123 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 PSENENQ9NZ42 101 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 FLVCR2Q9UPI3 526 aa8.2□□□□□ -1.1
USP3-220ENST00000561381 SSSCA1O60232 199 aa8.19□□□□□ -1.1
USP3-220ENST00000561381 OR5G3P0C626 314 aa8.19□□□□□ -1.1
USP3-220ENST00000561381 LINC00869P0C866 280 aa8.19□□□□□ -1.1
USP3-220ENST00000561381 DEFB130BP0DP73 79 aa8.19□□□□□ -1.1
USP3-220ENST00000561381 DEFB130AP0DP74 79 aa8.19□□□□□ -1.1
USP3-220ENST00000561381 S100A5P33763 92 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms