RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 HSD52Q0P140 79 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 SPATA31B1PQ5VZV4 182 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 EBLN2Q6P2I7 272 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 FA2HQ7L5A8 372 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 C11orf53Q8IXP5 236 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 FAM19A2Q8N3H0 131 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 C8orf31Q8N9H6 132 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 GATD1Q8NB37 220 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 HINT2Q9BX68 163 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 LOC102724200A0A096LPH7 203 aaPredicted RBP6.9□□□□□ -1.3
CCDC33-209ENST00000560565 GAGE12BA1L429 117 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 DEFB108AA8MXU0 73 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 SHISA9B4DS77 424 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 TAX1BP3O14907 124 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 SLC25A5P05141 298 aaKnown RBP6.9□□□□□ -1.3
CCDC33-209ENST00000560565 THBDP07204 575 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 DEFA4P12838 97 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 HTR1DP28221 377 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 APOBEC3AP31941 199 aaPredicted RBP6.9□□□□□ -1.3
CCDC33-209ENST00000560565 MC5RP33032 325 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 GATA4P43694 442 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 RPL8P62917 257 aaKnown RBP6.9□□□□□ -1.3
CCDC33-209ENST00000560565 MEF2CQ06413 473 aaPredicted RBP6.9□□□□□ -1.3
CCDC33-209ENST00000560565 PLGLAQ15195 96 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 VMA21Q3ZAQ7 101 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 MPV17L2Q567V2 206 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 LDLRAD2Q5SZI1 272 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 ALKBH2Q6NS38 261 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 WFDC8Q8IUA0 241 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 LYPD1Q8N2G4 141 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 MTURNQ8N3F0 131 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 SPATA3Q8NHX4 192 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 RFESDQ8TAC1 157 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 NRGNQ92686 78 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 SLC25A2Q9BXI2 301 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 PRSS22Q9GZN4 317 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 NPFFR1Q9GZQ6 430 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
CCDC33-209ENST00000560565 IGHV1-24A0A0C4DH33 117 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 C7orf71A4D174 169 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 SCGB2A1O75556 95 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 LTAP01374 205 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 SAA2P0DJI9 122 aaPredicted RBP6.89□□□□□ -1.31
CCDC33-209ENST00000560565 RNASE2P10153 161 aaKnown RBP6.89□□□□□ -1.31
CCDC33-209ENST00000560565 CEBPDP49716 269 aaPredicted RBP6.89□□□□□ -1.31
CCDC33-209ENST00000560565 CAMPP49913 170 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 FABP6P51161 128 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 TMEM177Q53S58 311 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 RPL39P5Q59GN2 51 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 TMEM97Q5BJF2 176 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 C22orf34Q6ZV56 151 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 ZCCHC24Q8N2G6 241 aaKnown RBP6.89□□□□□ -1.31
CCDC33-209ENST00000560565 CD177Q8N6Q3 437 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 OR5AN1Q8NGI8 311 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 OR4C13Q8NGP0 309 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 C1orf159Q96HA4 380 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 FAM167A-AS1Q96KT0 104 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 TRGV9Q99603 122 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 OTORQ9NRC9 128 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 NDUFA4L2Q9NRX3 87 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 TMEM14CQ9P0S9 112 aa6.89□□□□□ -1.31
CCDC33-209ENST00000560565 RAI1Q7Z5J4 1906 aaPredicted RBP6.89□□□□□ -1.31
CCDC33-209ENST00000560565 STAB1Q9NY15 2570 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 A0A1B0GUT8 65 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 PSMB11A5LHX3 300 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 C9orf118A6NHY6 69 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 NPIPB6E9PJ23 425 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 WNT9BO14905 357 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 CD3EP07766 207 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 CGB3P0DN86 165 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 CGB7P0DN87 165 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 LGALS7P47929 136 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 PLP1P60201 277 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 SLC35B1P78383 322 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 BSPH1Q075Z2 132 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 LGALS9BQ3B8N2 356 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 LGALS9CQ6DKI2 356 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 TMEM167AQ8TBQ9 72 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 Q8TCH9 128 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 PIFOQ8TCI5 191 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 TMEM186Q96B77 213 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 FLYWCH2Q96CP2 140 aaKnown RBP6.88□□□□□ -1.31
CCDC33-209ENST00000560565 ZNF503Q96F45 646 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 SRSF8Q9BRL6 282 aaKnown RBP6.88□□□□□ -1.31
CCDC33-209ENST00000560565 RNF7Q9UBF6 113 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 RPUSD1Q9UJJ7 312 aaKnown RBP6.88□□□□□ -1.31
CCDC33-209ENST00000560565 LINC00312Q9Y6C7 94 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 USF3Q68DE3 2245 aa6.88□□□□□ -1.31
CCDC33-209ENST00000560565 TLN2Q9Y4G6 2542 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 ZNF469Q96JG9 3925 aaPredicted RBP6.87□□□□□ -1.31
CCDC33-209ENST00000560565 IGKV1D-17A0A075B6S4 117 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 C19orf71A6NCJ1 209 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 K7EP34 96 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 NBEAP1P0C6P0 100 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 IGLC1P0CG04 106 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 FABP2P12104 132 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 MYCNOSP40205 109 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 PSG9Q00887 426 aa6.87□□□□□ -1.31
CCDC33-209ENST00000560565 LTC4SQ16873 150 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms