RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 SLC25A22Q9H936 323 aa10.35□□□□□ -0.75
HMBOX1-213ENST00000560269 UBQLN2Q9UHD9 624 aa10.35□□□□□ -0.75
HMBOX1-213ENST00000560269 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 IGHV3-49A0A0A0MS15 119 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 IGHV3-66A0A0C4DH42 116 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 STAG3L2P0CL84 134 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 STAG3L3P0CL85 134 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 BMI1P35226 326 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 TAS2R45P59539 299 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 KHDC3LQ587J8 217 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 ZNF767PQ75MW2 155 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 WFDC9Q8NEX5 89 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 LRRC20Q8TCA0 184 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 GLMPQ8WWB7 406 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 SAT2Q96F10 170 aaPredicted RBP10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 GPR82Q96P67 336 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 SLC25A2Q9BXI2 301 aa10.34□□□□□ -0.75
HMBOX1-213ENST00000560269 WNK1Q9H4A3 2382 aa10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 ZNF705EA8MWA4 302 aaPredicted RBP10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 MRPS12O15235 138 aaKnown RBP10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 PQLC2Q6ZP29 291 aa10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 OR8I2Q8N0Y5 310 aa10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 STXBP6Q8NFX7 210 aa10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 ZNF503Q96F45 646 aa10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 MLXQ9UH92 298 aa10.33□□□□□ -0.76
HMBOX1-213ENST00000560269 MAP1LC3B2A6NCE7 125 aa10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 EIF3GO75821 320 aaKnown RBP eCLIP10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 H2AFB1P0C5Y9 115 aa10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 GP9P14770 177 aa10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 RPL7P18124 248 aaKnown RBP10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 BLOC1S1P78537 153 aa10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 FAM90A2PQ658T7 463 aa10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 BPIFA4PQ86YQ2 179 aa10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 SPATA3Q8NHX4 192 aa10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 MAP1LC3BQ9GZQ8 125 aa10.32□□□□□ -0.76
HMBOX1-213ENST00000560269 TRAV1-1A0A0B4J248 108 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 RGS13O14921 159 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 HMGB3O15347 200 aaKnown RBP10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 CXorf1O96002 111 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 CD5P06127 495 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 SIGLEC15Q6ZMC9 328 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 SFT2D1Q8WV19 159 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 PAXXQ9BUH6 204 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 OR51M1Q9H341 326 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
HMBOX1-213ENST00000560269 A0A087X0K7 114 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 HELTA6NFD8 242 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 OR7C2O60412 319 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 SAP30O75446 220 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 ARL14EPLP0DKL9 152 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 IGLC2P0DOY2 106 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 PYYP10082 97 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 HIST1H1EP10412 219 aaKnown RBP10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 CD33P20138 364 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 GALR1P47211 349 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 DEFB114Q30KQ6 69 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 TCF24Q7RTU0 167 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 LYPD6BQ8NI32 183 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 SUN5Q8TC36 379 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 DYNLRB2Q8TF09 96 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 FXYD5Q96DB9 178 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 C17orf77Q96MU5 243 aa10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
HMBOX1-213ENST00000560269 IGLV1-51P01701 117 aa10.29□□□□□ -0.76
HMBOX1-213ENST00000560269 HBE1P02100 147 aa10.29□□□□□ -0.76
HMBOX1-213ENST00000560269 NMBP08949 121 aa10.29□□□□□ -0.76
HMBOX1-213ENST00000560269 GCHFRP30047 84 aa10.29□□□□□ -0.76
HMBOX1-213ENST00000560269 INSL3P51460 131 aa10.29□□□□□ -0.76
HMBOX1-213ENST00000560269 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
HMBOX1-213ENST00000560269 C9orf66Q5T8R8 295 aa10.29□□□□□ -0.76
HMBOX1-213ENST00000560269 HRH4Q9H3N8 390 aa10.29□□□□□ -0.76
HMBOX1-213ENST00000560269 TRRAPQ9Y4A5 3859 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 TRAV25A0A0B4J276 109 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 H3BQ15 152 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 TEX46H3BTG2 121 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 OR10J4P0C629 311 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 ATF4P18848 351 aaPredicted RBP10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 MEOX2P50222 304 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 UBE2L3P68036 154 aaKnown RBP10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 GUK1Q16774 197 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 CD300EQ496F6 205 aaPredicted RBP10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 OR2K2Q8NGT1 345 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 TMEM167BQ9NRX6 74 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 ZNF586Q9NXT0 402 aa10.28□□□□□ -0.76
HMBOX1-213ENST00000560269 ZNF785A8K8V0 405 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 TSPAN4O14817 238 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 WIPF1O43516 503 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 PSMB3P49720 205 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 RAB14P61106 215 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 CCL20P78556 96 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 PMS2P11Q13670 270 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 TMEM61Q8N0U2 210 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 PCNPQ8WW12 178 aaKnown RBP10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 TMPRSS5Q9H3S3 457 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 NRN1Q9NPD7 142 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms