RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GRAMD2BQ96HH9 432 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 MDFIQ99750 246 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 ELOVL1Q9BW60 279 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 TMEM231Q9H6L2 316 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 SMPXQ9UHP9 88 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 U3KQE9 123 aa7.94□□□□□ -1.14
TPM1-221ENST00000559831 M0QZ24 198 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 CHEK1O14757 476 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 BUB3O43684 328 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 CSN3P07498 182 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 SNRPCP09234 159 aaKnown RBP7.93□□□□□ -1.14
TPM1-221ENST00000559831 STAG3L2P0CL84 134 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 STAG3L3P0CL85 134 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 ARL14EPLP0DKL9 152 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 PYYP10082 97 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 FOLR2P14207 255 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 BMI1P35226 326 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 LINC00482Q8N8I6 264 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 DYNLRB2Q8TF09 96 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 MBD3L1Q8WWY6 194 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 SAT2Q96F10 170 aaPredicted RBP7.93□□□□□ -1.14
TPM1-221ENST00000559831 FAM167A-AS1Q96KT0 104 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 PAXXQ9BUH6 204 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 HRH4Q9H3N8 390 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 RNF24Q9Y225 148 aa7.93□□□□□ -1.14
TPM1-221ENST00000559831 TEX46H3BTG2 121 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 RGS13O14921 159 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 CXorf1O96002 111 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 HBE1P02100 147 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 NMBP08949 121 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 OR10J4P0C629 311 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 RPL7P18124 248 aaKnown RBP7.92□□□□□ -1.14
TPM1-221ENST00000559831 ATF4P18848 351 aaPredicted RBP7.92□□□□□ -1.14
TPM1-221ENST00000559831 CBLN1P23435 193 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 UBE2L3P68036 154 aaKnown RBP7.92□□□□□ -1.14
TPM1-221ENST00000559831 C16orf54Q6UWD8 224 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 IL34Q6ZMJ4 242 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 BPIFA4PQ86YQ2 179 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 GLMPQ8WWB7 406 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 MARC2Q969Z3 335 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 OR51M1Q9H341 326 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 TMPRSS5Q9H3S3 457 aa7.92□□□□□ -1.14
TPM1-221ENST00000559831 IGKV3-7A0A075B6H7 116 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 ZNF785A8K8V0 405 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 H3BTX0 84 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 SAP30O75446 220 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 GP9P14770 177 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 GCHFRP30047 84 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 GALR1P47211 349 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 RPL11P62913 178 aaKnown RBP7.91□□□□□ -1.14
TPM1-221ENST00000559831 C1orf194Q5T5A4 169 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 SIGLEC15Q6ZMC9 328 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 ADAMTSL5Q6ZMM2 481 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 PQLC2Q6ZP29 291 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 TCF24Q7RTU0 167 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 STXBP6Q8NFX7 210 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 BLNKQ8WV28 456 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 ZNF503Q96F45 646 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 GPR82Q96P67 336 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 MLXQ9UH92 298 aa7.91□□□□□ -1.14
TPM1-221ENST00000559831 FBN1P35555 2871 aaKnown RBP7.9□□□□□ -1.14
TPM1-221ENST00000559831 HELTA6NFD8 242 aa7.9□□□□□ -1.14
TPM1-221ENST00000559831 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
TPM1-221ENST00000559831 CD33P20138 364 aa7.9□□□□□ -1.14
TPM1-221ENST00000559831 CCL20P78556 96 aa7.9□□□□□ -1.14
TPM1-221ENST00000559831 CLLU1Q5K131 121 aa7.9□□□□□ -1.14
TPM1-221ENST00000559831 SPATA3Q8NHX4 192 aa7.9□□□□□ -1.14
TPM1-221ENST00000559831 FXYD5Q96DB9 178 aa7.9□□□□□ -1.14
TPM1-221ENST00000559831 TMEM14CQ9P0S9 112 aa7.9□□□□□ -1.14
TPM1-221ENST00000559831 TENM1Q9UKZ4 2725 aa7.9□□□□□ -1.15
TPM1-221ENST00000559831 TRAV1-1A0A0B4J248 108 aa7.89□□□□□ -1.15
TPM1-221ENST00000559831 H3BQ15 152 aa7.89□□□□□ -1.15
TPM1-221ENST00000559831 HIST1H1EP10412 219 aaKnown RBP7.89□□□□□ -1.15
TPM1-221ENST00000559831 UBE2G2P60604 165 aa7.89□□□□□ -1.15
TPM1-221ENST00000559831 C17orf77Q96MU5 243 aa7.89□□□□□ -1.15
TPM1-221ENST00000559831 TMEM167BQ9NRX6 74 aa7.89□□□□□ -1.15
TPM1-221ENST00000559831 ZNF586Q9NXT0 402 aa7.89□□□□□ -1.15
TPM1-221ENST00000559831 GNG13Q9P2W3 67 aa7.89□□□□□ -1.15
TPM1-221ENST00000559831 SMAD5-AS1Q9Y6J3 95 aa7.89□□□□□ -1.15
TPM1-221ENST00000559831 IFNA1P01562 189 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 NBEAP1P0C6P0 100 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 IGLC2P0DOY2 106 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 TFPI2P48307 235 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 PSMB3P49720 205 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 DEFB114Q30KQ6 69 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 RBPMS2Q6ZRY4 209 aaKnown RBP7.88□□□□□ -1.15
TPM1-221ENST00000559831 WFDC3Q8IUB2 231 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 GBGT1Q8N5D6 347 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 COL6A5A8TX70 2615 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 STAB1Q9NY15 2570 aa7.88□□□□□ -1.15
TPM1-221ENST00000559831 TRBV19A0A075B6N1 114 aa7.87□□□□□ -1.15
TPM1-221ENST00000559831 A0A087X0K7 114 aa7.87□□□□□ -1.15
TPM1-221ENST00000559831 DNASE2O00115 360 aaPredicted RBP7.87□□□□□ -1.15
TPM1-221ENST00000559831 SLC17A3O00476 420 aa7.87□□□□□ -1.15
TPM1-221ENST00000559831 PAGE4O60829 102 aa7.87□□□□□ -1.15
TPM1-221ENST00000559831 PPT1P50897 306 aa7.87□□□□□ -1.15
TPM1-221ENST00000559831 HAGHQ16775 308 aa7.87□□□□□ -1.15
TPM1-221ENST00000559831 CD300EQ496F6 205 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms