RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 MAP1LC3BQ9GZQ8 125 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 RNF24Q9Y225 148 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 TRAV1-1A0A0B4J248 108 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 IGHV3-66A0A0C4DH42 116 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 OVOL1O14753 267 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 PF4P02776 101 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 RIPPLY3P57055 190 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 KHDC3LQ587J8 217 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 IL34Q6ZMJ4 242 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 MDFIQ99750 246 aa13.74□□□□□ -0.21
CLPX-203ENST00000558958 ANK2Q01484 3957 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 A0A1W2PS18 150 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 CHEK1O14757 476 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 ARL14EPLP0DKL9 152 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 FOLR2P14207 255 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 CBLN1P23435 193 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 FGF8P55075 233 aaPredicted RBP13.73□□□□□ -0.21
CLPX-203ENST00000558958 RAB14P61106 215 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 C16orf54Q6UWD8 224 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 PQLC2Q6ZP29 291 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 LINC00482Q8N8I6 264 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 MARC2Q969Z3 335 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 ZNF503Q96F45 646 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
CLPX-203ENST00000558958 VWFP04275 2813 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 OR7C2O60412 319 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 CXorf1O96002 111 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 CLLU1Q5K131 121 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 ADAMTSL5Q6ZMM2 481 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 STXBP6Q8NFX7 210 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 LYPD6BQ8NI32 183 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 TMEM14CQ9P0S9 112 aa13.72□□□□□ -0.21
CLPX-203ENST00000558958 MRPS12O15235 138 aaKnown RBP13.71□□□□□ -0.21
CLPX-203ENST00000558958 CSN3P07498 182 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 GP9P14770 177 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 BMI1P35226 326 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 BPIFA4PQ86YQ2 179 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 GLMPQ8WWB7 406 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 GRAMD2BQ96HH9 432 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 GPR82Q96P67 336 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 ELOVL1Q9BW60 279 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 OR51M1Q9H341 326 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 TMEM231Q9H6L2 316 aa13.71□□□□□ -0.21
CLPX-203ENST00000558958 TRRAPQ9Y4A5 3859 aa13.7□□□□□ -0.22
CLPX-203ENST00000558958 A0A1B0GV50 99 aa13.7□□□□□ -0.22
CLPX-203ENST00000558958 TEX46H3BTG2 121 aa13.7□□□□□ -0.22
CLPX-203ENST00000558958 HBE1P02100 147 aa13.7□□□□□ -0.22
CLPX-203ENST00000558958 PYYP10082 97 aa13.7□□□□□ -0.22
CLPX-203ENST00000558958 RPL7P18124 248 aaKnown RBP13.7□□□□□ -0.22
CLPX-203ENST00000558958 PAXXQ9BUH6 204 aa13.7□□□□□ -0.22
CLPX-203ENST00000558958 HRH4Q9H3N8 390 aa13.7□□□□□ -0.22
CLPX-203ENST00000558958 GCHFRP30047 84 aa13.69□□□□□ -0.22
CLPX-203ENST00000558958 CCL20P78556 96 aa13.69□□□□□ -0.22
CLPX-203ENST00000558958 FXYD5Q96DB9 178 aa13.69□□□□□ -0.22
CLPX-203ENST00000558958 TMPRSS5Q9H3S3 457 aa13.69□□□□□ -0.22
CLPX-203ENST00000558958 M0QZ24 198 aa13.68□□□□□ -0.22
CLPX-203ENST00000558958 OR10J4P0C629 311 aa13.68□□□□□ -0.22
CLPX-203ENST00000558958 SIGLEC8Q9NYZ4 499 aa13.68□□□□□ -0.22
CLPX-203ENST00000558958 MLXQ9UH92 298 aa13.68□□□□□ -0.22
CLPX-203ENST00000558958 SMAD5-AS1Q9Y6J3 95 aa13.68□□□□□ -0.22
CLPX-203ENST00000558958 IGLC2P0DOY2 106 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 HIST1H1EP10412 219 aaKnown RBP13.67□□□□□ -0.22
CLPX-203ENST00000558958 GALR1P47211 349 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 UBE2L3P68036 154 aaKnown RBP13.67□□□□□ -0.22
CLPX-203ENST00000558958 SIGLEC15Q6ZMC9 328 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 IQCF2Q8IXL9 164 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 SUN5Q8TC36 379 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 H3BQ15 152 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 FAM90A2PQ658T7 463 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 C17orf77Q96MU5 243 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 TMEM167BQ9NRX6 74 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 SELENOKQ9Y6D0 94 aa13.67□□□□□ -0.22
CLPX-203ENST00000558958 HELTA6NFD8 242 aa13.66□□□□□ -0.22
CLPX-203ENST00000558958 SNRPCP09234 159 aaKnown RBP13.66□□□□□ -0.22
CLPX-203ENST00000558958 NBEAP1P0C6P0 100 aa13.66□□□□□ -0.22
CLPX-203ENST00000558958 PSMB3P49720 205 aa13.66□□□□□ -0.22
CLPX-203ENST00000558958 TCF24Q7RTU0 167 aa13.66□□□□□ -0.22
CLPX-203ENST00000558958 ZNF586Q9NXT0 402 aa13.66□□□□□ -0.22
CLPX-203ENST00000558958 A0A087X0K7 114 aa13.65□□□□□ -0.22
CLPX-203ENST00000558958 CD5P06127 495 aa13.65□□□□□ -0.22
CLPX-203ENST00000558958 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
CLPX-203ENST00000558958 PMS2P11Q13670 270 aa13.65□□□□□ -0.22
CLPX-203ENST00000558958 DEFB114Q30KQ6 69 aa13.65□□□□□ -0.22
CLPX-203ENST00000558958 SPATA3Q8NHX4 192 aa13.65□□□□□ -0.22
CLPX-203ENST00000558958 TRBV19A0A075B6N1 114 aa13.64□□□□□ -0.23
CLPX-203ENST00000558958 ZNF785A8K8V0 405 aa13.64□□□□□ -0.23
CLPX-203ENST00000558958 H3BTX0 84 aa13.64□□□□□ -0.23
CLPX-203ENST00000558958 WFDC9Q8NEX5 89 aa13.64□□□□□ -0.23
CLPX-203ENST00000558958 DYNLRB2Q8TF09 96 aa13.64□□□□□ -0.23
CLPX-203ENST00000558958 BLNKQ8WV28 456 aa13.64□□□□□ -0.23
CLPX-203ENST00000558958 SAP30O75446 220 aa13.63□□□□□ -0.23
CLPX-203ENST00000558958 PPT1P50897 306 aa13.63□□□□□ -0.23
CLPX-203ENST00000558958 RPL11P62913 178 aaKnown RBP13.63□□□□□ -0.23
CLPX-203ENST00000558958 GUK1Q16774 197 aa13.63□□□□□ -0.23
CLPX-203ENST00000558958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.63□□□□□ -0.23
CLPX-203ENST00000558958 GNG13Q9P2W3 67 aa13.63□□□□□ -0.23
CLPX-203ENST00000558958 NDUFB4O95168 129 aa13.62□□□□□ -0.23
CLPX-203ENST00000558958 MEOX2P50222 304 aa13.62□□□□□ -0.23
CLPX-203ENST00000558958 PDE6HQ13956 83 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms