RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 PDZD11Q5EBL8 140 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 COA6Q5JTJ3 125 aaKnown RBP6.04□□□□□ -1.44
LRRC28-211ENST00000558890 SRSF12Q8WXF0 261 aaKnown RBP6.04□□□□□ -1.44
LRRC28-211ENST00000558890 TMEM37Q8WXS4 190 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 TMEM190Q8WZ59 177 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 ZNF503Q96F45 646 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 FAM167A-AS1Q96KT0 104 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 PACRGQ96M98 296 aaPredicted RBP6.04□□□□□ -1.44
LRRC28-211ENST00000558890 TMEM68Q96MH6 324 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 FBXL15Q9H469 300 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 OSTCQ9NRP0 149 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 WNK1Q9H4A3 2382 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 MGAM2Q2M2H8 2515 aa6.04□□□□□ -1.44
LRRC28-211ENST00000558890 VWFP04275 2813 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 PKD1L1Q8TDX9 2849 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 IGKV1D-37A0A075B6S9 117 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 TRBV9A0A0B4J1U6 114 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 TRAV5A0A0B4J249 113 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 A0A1W2PRD5 423 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 A0A1W2PRF3 423 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 A0A1W2PRM7 423 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 PSMB11A5LHX3 300 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 DNAJC9-AS1A6NH13 148 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 IFITM10A6NMD0 228 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 NDUFA7O95182 113 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 CNIH1O95406 144 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 BRI3O95415 125 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 MGST1P10620 155 aaKnown RBP6.03□□□□□ -1.44
LRRC28-211ENST00000558890 HIST1H1BP16401 226 aaKnown RBP6.03□□□□□ -1.44
LRRC28-211ENST00000558890 ORM2P19652 201 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 CNTFRP26992 372 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 SUMO1P63165 101 aaKnown RBP6.03□□□□□ -1.44
LRRC28-211ENST00000558890 SSBP2P81877 361 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-211ENST00000558890 MMDQ15546 238 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 C5orf64Q2M2E5 130 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 MRGPRG-AS1Q2M3A8 158 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 ZNF562Q6V9R5 426 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 C5orf56Q8N8D9 126 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 Q8N9W7 124 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 TMEM116Q8NCL8 245 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 OR1B1Q8NGR6 318 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 RITA1Q96K30 269 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 CHRDL1Q9BU40 450 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 NPFFR1Q9GZQ6 430 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 DMRT1Q9Y5R6 373 aa6.03□□□□□ -1.44
LRRC28-211ENST00000558890 A0A1B0GUS0 222 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 TEX22C9J3V5 150 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 K7EN84 100 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 PEX7O00628 323 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 ISLRO14498 428 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 HOXA3O43365 443 aaPredicted RBP6.02□□□□□ -1.45
LRRC28-211ENST00000558890 SCGB2A1O75556 95 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 GCGP01275 180 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 IGHV3-48P01763 117 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 IGHV4-59P01825 116 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 IGHG2P01859 326 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 MT-ND6P03923 174 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 IGF1P05019 195 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 PYYP10082 97 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 UBE2G1P62253 170 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 HES1Q14469 280 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 KLK9Q2XQG4 91 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 PYY3Q5JQD4 70 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 GFI1BQ5VTD9 330 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 WDR73Q6P4I2 378 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 LINC00305Q7Z4B0 112 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 S100A7AQ86SG5 101 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 ZNF329Q86UD4 541 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 TMEM18Q96B42 140 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 FXYD5Q96DB9 178 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 IGF2BP2-AS1Q96M15 143 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 HIST1H2BLQ99880 126 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 RASL11BQ9BPW5 248 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 C16orf95Q9H693 158 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 GSN-AS1Q9NRJ2 163 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 MRPL36Q9P0J6 103 aaKnown RBP6.02□□□□□ -1.45
LRRC28-211ENST00000558890 KLK9Q9UKQ9 250 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 HIGD1AQ9Y241 93 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 NBEAL1Q6ZS30 2694 aa6.02□□□□□ -1.45
LRRC28-211ENST00000558890 TMEM89A2RUT3 159 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 SLC17A3O00476 420 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 AMBPP02760 352 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 SLC25A5P05141 298 aaKnown RBP6.01□□□□□ -1.45
LRRC28-211ENST00000558890 APELAP0DMC3 54 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 MFAP2P55001 183 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 PLP1P60201 277 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 YPEL3P61236 119 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-211ENST00000558890 LYZP61626 148 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 OR5I1Q13606 314 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 FBLN7Q53RD9 439 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 IBA57Q5T440 356 aaKnown RBP6.01□□□□□ -1.45
LRRC28-211ENST00000558890 MORN5Q5VZ52 161 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 PATE2Q6UY27 113 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-211ENST00000558890 SMIM12Q96EX1 92 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 PRSS22Q9GZN4 317 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 SERTAD4Q9NUC0 356 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 V9GYV3 84 aa6.01□□□□□ -1.45
LRRC28-211ENST00000558890 TRAV30A0A087WSZ9 112 aa6□□□□□ -1.45
LRRC28-211ENST00000558890 IGHV3-21A0A0B4J1V1 117 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms