RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 DTD1Q8TEA8 209 aa12.3□□□□□ -0.44
TSPAN3-204ENST00000558394 NAA60Q9H7X0 242 aa12.3□□□□□ -0.44
TSPAN3-204ENST00000558394 ZNF701M0R085 212 aaPredicted RBP12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 ATP5IP56385 69 aaPredicted RBP12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 GGNBP1Q5YKI7 109 aa12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 IGFL4Q6B9Z1 124 aa12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 TMEM263Q8WUH6 116 aaKnown RBP12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 YIPF6Q96EC8 236 aa12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 GPR82Q96P67 336 aa12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 TRGV9Q99603 122 aa12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
TSPAN3-204ENST00000558394 ZNF98A6NK75 572 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 FAM25AB3EWG3 89 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 FAM25CB3EWG5 89 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 FAM25GB3EWG6 89 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 SMR3BP02814 79 aaPredicted RBP12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 HIST1H1AQ02539 215 aaPredicted RBP12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 ICAM4Q14773 271 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 RNF182Q8N6D2 247 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 OR4D5Q8NGN0 318 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
TSPAN3-204ENST00000558394 H3BNG1 76 aa12.27□□□□□ -0.45
TSPAN3-204ENST00000558394 RAB3DO95716 219 aa12.27□□□□□ -0.45
TSPAN3-204ENST00000558394 Q6ZRN7 208 aaPredicted RBP12.27□□□□□ -0.45
TSPAN3-204ENST00000558394 CCDC28AQ8IWP9 274 aa12.27□□□□□ -0.45
TSPAN3-204ENST00000558394 OR4D10Q8NGI6 311 aa12.27□□□□□ -0.45
TSPAN3-204ENST00000558394 RBKSQ9H477 322 aa12.27□□□□□ -0.45
TSPAN3-204ENST00000558394 SLC45A2Q9UMX9 530 aa12.27□□□□□ -0.45
TSPAN3-204ENST00000558394 A0A087WXM4 84 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 SIVA1O15304 175 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 HPGDSO60760 199 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 RLN2P04090 185 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 ORM2P19652 201 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 TAS2R19P59542 299 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 RAB11AP62491 216 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 Q6ZSN1 163 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 OR52I2Q8NH67 350 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 RNASE8Q8TDE3 154 aaKnown RBP12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 TMEM147Q9BVK8 224 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 HSPB7Q9UBY9 170 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 MTFP1Q9UDX5 166 aa12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 PAIP2BQ9ULR5 123 aaKnown RBP12.26□□□□□ -0.45
TSPAN3-204ENST00000558394 GAGE12BA1L429 117 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 GAGE7O76087 117 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 GAGE12IP0CL82 117 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 CCR6P51684 374 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 SMCO1Q147U7 214 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 GPR107Q5VW38 600 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 TMEM229BQ8NBD8 167 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 OR8A1Q8NGG7 326 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 RTBDNQ9BSG5 229 aaPredicted RBP12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 TMEM56-RWDD3S4R434 201 aa12.25□□□□□ -0.45
TSPAN3-204ENST00000558394 TRAV8-2A0A0B4J237 113 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 SNURFLB1AK76 121 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 H7BYZ3 331 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 HOXA5P20719 270 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 CDKN1BP46527 198 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 KRTAP10-1P60331 282 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 STEAP1BQ6NZ63 245 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 BPIFCQ8NFQ6 507 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 IL22RA2Q969J5 263 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 SRRM2Q9UQ35 2752 aaKnown RBP12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 KCNIP3Q9Y2W7 256 aa12.24□□□□□ -0.45
TSPAN3-204ENST00000558394 CRYM-AS1A6NIL9 109 aa12.23□□□□□ -0.45
TSPAN3-204ENST00000558394 NCS1P62166 190 aa12.23□□□□□ -0.45
TSPAN3-204ENST00000558394 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
TSPAN3-204ENST00000558394 THAP8Q8NA92 274 aa12.23□□□□□ -0.45
TSPAN3-204ENST00000558394 LRRC20Q8TCA0 184 aa12.23□□□□□ -0.45
TSPAN3-204ENST00000558394 VPS13BQ7Z7G8 4022 aa12.22□□□□□ -0.45
TSPAN3-204ENST00000558394 AKR1C4P17516 323 aa12.22□□□□□ -0.45
TSPAN3-204ENST00000558394 MZT2AQ6P582 158 aa12.22□□□□□ -0.45
TSPAN3-204ENST00000558394 LINC00612Q8N6U2 182 aa12.22□□□□□ -0.45
TSPAN3-204ENST00000558394 OR1S1Q8NH92 325 aa12.22□□□□□ -0.45
TSPAN3-204ENST00000558394 C15orf40Q8WUR7 153 aa12.22□□□□□ -0.45
TSPAN3-204ENST00000558394 IGKV1OR2-108A0A075B7D4 117 aa12.21□□□□□ -0.45
TSPAN3-204ENST00000558394 DISC1C4P0D8 188 aa12.21□□□□□ -0.45
TSPAN3-204ENST00000558394 RPL7P18124 248 aaKnown RBP12.21□□□□□ -0.45
TSPAN3-204ENST00000558394 GCSHP23434 173 aa12.21□□□□□ -0.45
TSPAN3-204ENST00000558394 VBP1P61758 197 aa12.21□□□□□ -0.45
TSPAN3-204ENST00000558394 C20orf144Q9BQM9 153 aa12.21□□□□□ -0.45
TSPAN3-204ENST00000558394 FUNDC2Q9BWH2 189 aa12.21□□□□□ -0.45
TSPAN3-204ENST00000558394 EXTL2Q9UBQ6 330 aa12.21□□□□□ -0.45
TSPAN3-204ENST00000558394 A0A087WTM6 91 aa12.2□□□□□ -0.46
TSPAN3-204ENST00000558394 RAP2BP61225 183 aa12.2□□□□□ -0.46
TSPAN3-204ENST00000558394 FAAP20Q6NZ36 180 aa12.2□□□□□ -0.46
TSPAN3-204ENST00000558394 PRR13Q9NZ81 148 aa12.2□□□□□ -0.46
TSPAN3-204ENST00000558394 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 A0A096LPF7 62 aa12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 NXPH4O95158 308 aa12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 DNAH10OSP0CZ25 163 aa12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 GATA2P23769 480 aaPredicted RBP12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 PSG3Q16557 428 aa12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 TMPRSS5Q9H3S3 457 aa12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
TSPAN3-204ENST00000558394 GPR132Q9UNW8 380 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms