RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 SERTM2A0A1B0GWG4 89 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 K7EIM0 57 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 BMPR1BO00238 502 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 SPINK4O60575 86 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 ZNF253O75346 499 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 OR2J3O76001 311 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 SRIP30626 198 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 MFAP4P55083 255 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 DLX1P56177 255 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 LINC00310P59036 64 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 NHLH1Q02575 133 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 HES1Q14469 280 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 Q86TA4 180 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 WFDC3Q8IUB2 231 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 TMEM75Q8N9X5 138 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 ARPC1AQ92747 370 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 NEU1Q99519 415 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 HSPB9Q9BQS6 159 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 RPH3ALQ9UNE2 315 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 TBL2Q9Y4P3 447 aaKnown RBP5.75□□□□□ -1.49
VPS13C-206ENST00000558338 HILPDAQ9Y5L2 63 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 MALRD1Q5VYJ5 2156 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 ZFHX2Q9C0A1 2572 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-206ENST00000558338 RP1L1Q8IWN7 2480 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-206ENST00000558338 C19orf71A6NCJ1 209 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 HIGD1CA8MV81 97 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 GNG7O60262 68 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 NUPR1O60356 82 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 IGKV1-17P01599 117 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 HLA-DRB1P01911 266 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 HOXB4P17483 251 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-206ENST00000558338 HBBP68871 147 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 SLC35B1P78383 322 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 KLF5Q13887 457 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-206ENST00000558338 PDE6HQ13956 83 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 EBI3Q14213 229 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 RUSC1-AS1Q66K80 236 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 CYB5R2Q6BCY4 276 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 TOMM20LQ6UXN7 152 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 ZNF562Q6V9R5 426 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 TEX43Q6ZNM6 134 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 C19orf35Q6ZS72 473 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 Q6ZWC4 215 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 TBX15Q96SF7 602 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 PRSS22Q9GZN4 317 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 C1RLQ9NZP8 487 aa5.75□□□□□ -1.49
VPS13C-206ENST00000558338 NAV3Q8IVL0 2385 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 IGLV11-55A0A075B6I3 123 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 TRBV19A0A075B6N1 114 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 A0A1B0GXF2 115 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 WI2-2373I1.2A0A1W2PRP0 233 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 GAGE10A6NGK3 116 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 FBLL1A6NHQ2 334 aaKnown RBP5.74□□□□□ -1.49
VPS13C-206ENST00000558338 NPIPB6E9PJ23 425 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 ZNF324O75467 553 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-206ENST00000558338 CA1P00915 261 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-206ENST00000558338 GPX1P07203 203 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 RAB4AP20338 218 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 AMTP48728 403 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 PRB3Q04118 309 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-206ENST00000558338 KLRD1Q13241 179 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 VMO1Q7Z5L0 202 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 TTC9CQ8N5M4 171 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 C2orf88Q9BSF0 95 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 ZFP30Q9Y2G7 519 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 ASPMQ8IZT6 3477 aa5.74□□□□□ -1.49
VPS13C-206ENST00000558338 A6NNC1 897 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 IGLC2P0DOY2 106 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 LDLRAD2Q5SZI1 272 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 Q8N6K4 173 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 ZNF491Q8N8L2 437 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 FAM168AQ92567 244 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 C20orf144Q9BQM9 153 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 VAMP8Q9BV40 100 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 GSX1Q9H4S2 264 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-206ENST00000558338 AAMDCQ9H7C9 122 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 PKDREJQ9NTG1 2253 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 POLEQ07864 2286 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 PTPRQQ9UMZ3 2332 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 A0A1B0GW15 77 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 A0A1W2PS18 150 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 PRSS29PA6NIE9 313 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 F2Z2F3 143 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 LY6HO94772 140 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 IL4P05112 153 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 FRMD6-AS1P0C7T7 363 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 FAM106CPP0CH98 169 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 PMCHP20382 165 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 COL8A1P27658 744 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 FCGR2BP31994 310 aaPredicted RBP5.73□□□□□ -1.49
VPS13C-206ENST00000558338 EFNA4P52798 201 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 TIRAPP58753 221 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 PSG9Q00887 426 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 SLAQ13239 276 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 CDSNQ15517 529 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 KIAA1644Q3SXP7 199 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 LEMD1Q68G75 181 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 Q6AWC8 147 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 GOLT1AQ6ZVE7 132 aa5.73□□□□□ -1.49
VPS13C-206ENST00000558338 LHFPL4Q7Z7J7 247 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms