RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 HOXC5Q00444 222 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 LINC00303Q3SY05 128 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 MRPL54Q6P161 138 aaKnown RBP1.66□□□□□ -2.14
SPG11-206ENST00000558093 C22orf39Q6P5X5 142 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 IZUMO2Q6UXV1 221 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 BRD3OSQ6XYD6 125 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 FOXI2Q6ZQN5 318 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 ZNF720Q7Z2F6 126 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 RPS19BP1Q86WX3 136 aaKnown RBP1.66□□□□□ -2.14
SPG11-206ENST00000558093 LINC00311Q8N616 119 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 LINC00304Q8N9R0 145 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 ZNF555Q8NEP9 628 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 OR4A5Q8NH83 315 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 C2orf15Q8WU43 125 aaKnown RBP1.66□□□□□ -2.14
SPG11-206ENST00000558093 RNASE6Q93091 150 aaKnown RBP1.66□□□□□ -2.14
SPG11-206ENST00000558093 MAL2Q969L2 176 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 SLC25A46Q96AG3 418 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 CAMK2N2Q96S95 79 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 TBL1YQ9BQ87 522 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 VAMP8Q9BV40 100 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 DUSP21Q9H596 190 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 RPRMQ9NS64 109 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 CCDC167Q9P0B6 97 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 MPC1Q9Y5U8 109 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 RGPD3A6NKT7 1758 aaPredicted RBP1.66□□□□□ -2.14
SPG11-206ENST00000558093 MCM3APO60318 1980 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 ANKRD12Q6UB98 2062 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 MICAL3Q7RTP6 2002 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 CC2D2AQ9P2K1 1620 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 EEA1Q15075 1411 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 UACAQ9BZF9 1416 aa1.66□□□□□ -2.14
SPG11-206ENST00000558093 PPLO60437 1756 aa1.65□□□□□ -2.14
SPG11-206ENST00000558093 RBBP6Q7Z6E9 1792 aaKnown RBP1.65□□□□□ -2.14
SPG11-206ENST00000558093 KIDINS220Q9ULH0 1771 aa1.65□□□□□ -2.14
SPG11-206ENST00000558093 NCAPD3P42695 1498 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 TRGV10A0A0A0MS01 117 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 IGKV1-12A0A0C4DH73 117 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 OR2T8A6NH00 312 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 A8MWV9 139 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 BUB1B-PAK6H3BSN5 160 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 IGKV1-39P01597 117 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 IGKV1D-12P01611 117 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 MT-ND6P03923 174 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 IGKV1D-39P04432 117 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BOP23527 126 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BBP33778 126 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BDP58876 126 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 TMEM258P61165 79 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 SNRPD3P62318 126 aaKnown RBP1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BCP62807 126 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 RPL30P62888 115 aaKnown RBP1.65□□□□□ -2.15
SPG11-206ENST00000558093 BSPH1Q075Z2 132 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 ZNF816Q0VGE8 651 aaPredicted RBP1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST2H2BEQ16778 126 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 Q5BKY6 102 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.65□□□□□ -2.15
SPG11-206ENST00000558093 C9orf153Q5TBE3 101 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 AADACL3Q5VUY0 350 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 NTM-AS1Q6ZSK4 140 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 AAED1Q7RTV5 226 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 SVBPQ8N300 66 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 C10orf126Q8N4M7 172 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 OR8A1Q8NGG7 326 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 OR10AC1Q8NH08 325 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BHQ93079 126 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BNQ99877 126 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 HIST1H2BMQ99879 126 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 RNF5Q99942 180 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 SNRNP25Q9BV90 132 aaKnown RBP1.65□□□□□ -2.15
SPG11-206ENST00000558093 MRPL32Q9BYC8 188 aaKnown RBP1.65□□□□□ -2.15
SPG11-206ENST00000558093 REG4Q9BYZ8 158 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 DPY30Q9C005 99 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 ATG5Q9H1Y0 275 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 TUBA4BQ9H853 241 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 PLEKHF2Q9H8W4 249 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 SAR1AQ9NR31 198 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 TAC3Q9UHF0 121 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 CCDC88CQ9P219 2028 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 DOCK2Q92608 1830 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 ABCA10Q8WWZ4 1543 aa1.65□□□□□ -2.15
SPG11-206ENST00000558093 COL27A1Q8IZC6 1860 aaPredicted RBP1.65□□□□□ -2.15
SPG11-206ENST00000558093 ZNF407Q9C0G0 2248 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 PIK3C2AO00443 1686 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 SNRNP200O75643 2136 aaKnown RBP1.64□□□□□ -2.15
SPG11-206ENST00000558093 CCDC88BA6NC98 1476 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 SPHKAPQ2M3C7 1700 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 IGKV1-9A0A0C4DH69 117 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 IGKV1-6A0A0C4DH72 117 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 A0A0D9SEW6 157 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 C9JCJ5 164 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 GEMIN2O14893 280 aaKnown RBP1.64□□□□□ -2.15
SPG11-206ENST00000558093 RER1O15258 196 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 NDUFB3O43676 98 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 APOC3P02656 99 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 SLC25A5P05141 298 aaKnown RBP1.64□□□□□ -2.15
SPG11-206ENST00000558093 IGLC1P0CG04 106 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 PYYP10082 97 aa1.64□□□□□ -2.15
SPG11-206ENST00000558093 SRP14P37108 136 aaKnown RBP1.64□□□□□ -2.15
SPG11-206ENST00000558093 ETV6P41212 452 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms