RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 Q56UQ5 140 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 AKR1C8PQ5T2L2 129 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 PXDC1Q5TGL8 231 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 TMEM182Q6ZP80 229 aaPredicted RBP5.64□□□□□ -1.51
SPG11-205ENST00000558080 Q6ZRG5 221 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 RBPMS2Q6ZRY4 209 aaKnown RBP5.64□□□□□ -1.51
SPG11-205ENST00000558080 SLC16A13Q7RTY0 426 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 SLC24A4Q8NFF2 622 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 MARC2Q969Z3 335 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 PSMG3Q9BT73 122 aaPredicted RBP5.64□□□□□ -1.51
SPG11-205ENST00000558080 CHRDL1Q9BU40 450 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 C20orf24Q9BUV8 137 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 GGACTQ9BVM4 153 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 WDR61Q9GZS3 305 aaKnown RBP5.64□□□□□ -1.51
SPG11-205ENST00000558080 UQCC1Q9NVA1 299 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 C21orf62Q9NYP8 219 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 MRPL27Q9P0M9 148 aaKnown RBP5.64□□□□□ -1.51
SPG11-205ENST00000558080 TIMM9Q9Y5J7 89 aa5.64□□□□□ -1.51
SPG11-205ENST00000558080 CSMD3Q7Z407 3707 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 TRAV25A0A0B4J276 109 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 UBE2L5PA0A1B0GUS4 154 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 KRBOX1C9JBD0 128 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 C17orf112F2Z3M2 114 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 INS-IGF2F8WCM5 200 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 TEX46H3BTG2 121 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 K7EIM0 57 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 ELLP55199 621 aaPredicted RBP5.63□□□□□ -1.51
SPG11-205ENST00000558080 RAB2AP61019 212 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 DLK1P80370 383 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 SERF2P84101 59 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 TOR2AQ5JU69 321 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 SPSB3Q6PJ21 355 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 OR1L6Q8NGR2 347 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 OR1P1Q8NH06 330 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 FAM213BQ8TBF2 198 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 TMEM190Q8WZ59 177 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 HRH4Q9H3N8 390 aa5.63□□□□□ -1.51
SPG11-205ENST00000558080 DYNC2H1Q8NCM8 4307 aaKnown RBP5.62□□□□□ -1.51
SPG11-205ENST00000558080 IGHV3-49A0A0A0MS15 119 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 FNDC10F2Z333 226 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 NDUFA4O00483 81 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 MPDU1O75352 247 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 YIF1AO95070 293 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 HBE1P02100 147 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 MBP02144 154 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 IFNA4P05014 189 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 CTSGP08311 255 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 FGF7P21781 194 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 MFAP4P55083 255 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 ERHP84090 104 aaKnown RBP5.62□□□□□ -1.51
SPG11-205ENST00000558080 ZNF709Q8N972 641 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 LYPD6BQ8NI32 183 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 DAZ1Q9NQZ3 744 aaKnown RBP5.62□□□□□ -1.51
SPG11-205ENST00000558080 KCNIP2Q9NS61 270 aa5.62□□□□□ -1.51
SPG11-205ENST00000558080 LOC102724200A0A096LPH7 203 aaPredicted RBP5.61□□□□□ -1.51
SPG11-205ENST00000558080 PRSS46E5RG02 174 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 I3L2K1 104 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 K7EMT4 169 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 TSPAN4O14817 238 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 NUPL2O15504 423 aaKnown RBP5.61□□□□□ -1.51
SPG11-205ENST00000558080 MT-CO2P00403 227 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 SNCAP37840 140 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 SUB1P53999 127 aaKnown RBP eCLIP5.61□□□□□ -1.51
SPG11-205ENST00000558080 BSXQ3C1V8 233 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 C2orf83Q53S99 150 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 TMEM41BQ5BJD5 291 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 ZNF414Q96IQ9 312 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 ATP6V0BQ99437 205 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 RSG1Q9BU20 258 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 GGTLC1Q9BX51 225 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 SMPXQ9UHP9 88 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 WDR83OSQ9Y284 106 aa5.61□□□□□ -1.51
SPG11-205ENST00000558080 IGKV3-7A0A075B6H7 116 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 IGHV3OR16-13A0A075B7E8 117 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 IGHV3-74A0A0B4J1X5 117 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 IGHV7-4-1A0A0J9YVY3 117 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 LCE6AA0A183 80 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 SMCO3A2RU48 225 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 GNG7O60262 68 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 RNASE2P10153 161 aaKnown RBP5.6□□□□□ -1.51
SPG11-205ENST00000558080 TFPI2P48307 235 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 RELQ04864 619 aaPredicted RBP5.6□□□□□ -1.51
SPG11-205ENST00000558080 RAB31Q13636 194 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 ZNF114Q8NC26 417 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 TMEM116Q8NCL8 245 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 BPIFCQ8NFQ6 507 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 RNASEH2CQ8TDP1 164 aaKnown RBP5.6□□□□□ -1.51
SPG11-205ENST00000558080 TMEM170AQ8WVE7 144 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 NARS2Q96I59 477 aaKnown RBP5.6□□□□□ -1.51
SPG11-205ENST00000558080 RNF2Q99496 336 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 TXN2Q99757 166 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 SPAG8Q99932 426 aaPredicted RBP5.6□□□□□ -1.51
SPG11-205ENST00000558080 OVOL2Q9BRP0 275 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 PBDC1Q9BVG4 233 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 RHPN1-AS1Q9BWJ2 59 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 NPCDR1Q9BY65 106 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 NPVFQ9HCQ7 196 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 TREM1Q9NP99 234 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 STARD9Q9P2P6 4700 aa5.6□□□□□ -1.51
SPG11-205ENST00000558080 TRAV1-1A0A0B4J248 108 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms