RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 NKX6-2Q9C056 277 aaPredicted RBP9.48□□□□□ -0.89
TPM1-209ENST00000558072 OR51M1Q9H341 326 aa9.48□□□□□ -0.89
TPM1-209ENST00000558072 VSIRQ9H7M9 311 aa9.48□□□□□ -0.89
TPM1-209ENST00000558072 SEPSECSQ9HD40 501 aaKnown RBP9.48□□□□□ -0.89
TPM1-209ENST00000558072 C2orf70A6NJV1 201 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 HIST1H1EP10412 219 aaKnown RBP9.47□□□□□ -0.89
TPM1-209ENST00000558072 ATF4P18848 351 aaPredicted RBP9.47□□□□□ -0.89
TPM1-209ENST00000558072 INSL3P51460 131 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 SLURP1P55000 103 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 PAFAH1B2P68402 229 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 IFITM2Q01629 132 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 GCSAMLQ5JQS6 135 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 FAM74A1Q5RGS3 127 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 UNQ9165/PRO28630Q6UXU0 137 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 IL34Q6ZMJ4 242 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 SUN5Q8TC36 379 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 DLX4Q92988 240 aaPredicted RBP9.47□□□□□ -0.89
TPM1-209ENST00000558072 TXNDC17Q9BRA2 123 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 PAXXQ9BUH6 204 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 SLC25A22Q9H936 323 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 ARL2-SNX15V9GYD0 113 aa9.47□□□□□ -0.89
TPM1-209ENST00000558072 TRAV25A0A0B4J276 109 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 CBLN1P23435 193 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 PDE6HQ13956 83 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 TM4SF20Q53R12 229 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 C16orf54Q6UWD8 224 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 LCN15Q6UWW0 184 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 MIR17HGQ75NE6 70 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 OR2K2Q8NGT1 345 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 DYNLRB2Q8TF09 96 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 UHRF2Q96PU4 802 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 MANBALQ9NQG1 85 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 RFNGQ9Y644 331 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 ATRQ13535 2644 aa9.46□□□□□ -0.9
TPM1-209ENST00000558072 TMEM213A2RRL7 107 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 ZNF785A8K8V0 405 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 CHEK1O14757 476 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 ZNF253O75346 499 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 FOLR2P14207 255 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 GCHFRP30047 84 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 UBE2L3P68036 154 aaKnown RBP9.45□□□□□ -0.9
TPM1-209ENST00000558072 PSG9Q00887 426 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 SIGLEC15Q6ZMC9 328 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 LYPD1Q8N2G4 141 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 LYPD6BQ8NI32 183 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 SCRT1Q9BWW7 348 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 HRH4Q9H3N8 390 aa9.45□□□□□ -0.9
TPM1-209ENST00000558072 ZMAT5Q9UDW3 170 aaKnown RBP9.45□□□□□ -0.9
TPM1-209ENST00000558072 A0A087X0K7 114 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 TRAV2A0A0B4J234 112 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 ZNF207O43670 478 aaKnown RBP9.44□□□□□ -0.9
TPM1-209ENST00000558072 NMBP08949 121 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 NBEAP1P0C6P0 100 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 ARL14EPLP0DKL9 152 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 FHITP49789 147 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 ZNF726P1Q15940 193 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 KRTAP21-3Q3LHN1 58 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 IQCF2Q8IXL9 164 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 FAM167A-AS1Q96KT0 104 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 TCEAL7Q9BRU2 100 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 SLC25A2Q9BXI2 301 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 PLA2G2EQ9NZK7 142 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 TENM1Q9UKZ4 2725 aa9.44□□□□□ -0.9
TPM1-209ENST00000558072 IGHV3OR16-8A0A075B7F1 116 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 NDUFS6O75380 124 aaKnown RBP9.43□□□□□ -0.9
TPM1-209ENST00000558072 CD33P20138 364 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 ID1P41134 155 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 CMC4P56277 68 aaPredicted RBP9.43□□□□□ -0.9
TPM1-209ENST00000558072 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
TPM1-209ENST00000558072 C9orf66Q5T8R8 295 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 SPATA31B1PQ5VZV4 182 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 RBPMS2Q6ZRY4 209 aaKnown RBP9.43□□□□□ -0.9
TPM1-209ENST00000558072 ARL6IP6Q8N6S5 226 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 LINC00482Q8N8I6 264 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 GLMPQ8WWB7 406 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 ZNF414Q96IQ9 312 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 AAMDCQ9H7C9 122 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 MED9Q9NWA0 146 aa9.43□□□□□ -0.9
TPM1-209ENST00000558072 A0A1W2PRE2 83 aa9.42□□□□□ -0.9
TPM1-209ENST00000558072 CSN3P07498 182 aa9.42□□□□□ -0.9
TPM1-209ENST00000558072 GP9P14770 177 aa9.42□□□□□ -0.9
TPM1-209ENST00000558072 TCF24Q7RTU0 167 aa9.42□□□□□ -0.9
TPM1-209ENST00000558072 WFDC9Q8NEX5 89 aa9.42□□□□□ -0.9
TPM1-209ENST00000558072 NRN1Q9NPD7 142 aa9.42□□□□□ -0.9
TPM1-209ENST00000558072 PRELID1Q9Y255 219 aa9.42□□□□□ -0.9
TPM1-209ENST00000558072 TRAV5A0A0B4J249 113 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 RAB19A4D1S5 217 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 F6UZH7 168 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 DNASE2O00115 360 aaPredicted RBP9.41□□□□□ -0.9
TPM1-209ENST00000558072 HMGB3O15347 200 aaKnown RBP9.41□□□□□ -0.9
TPM1-209ENST00000558072 SAP30O75446 220 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 IGLC2P0DOY2 106 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 EDN2P20800 178 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 FGF8P55075 233 aaPredicted RBP9.41□□□□□ -0.9
TPM1-209ENST00000558072 PEA15Q15121 130 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms