RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 JMJD1CQ15652 2540 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 BUB3O43684 328 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 GCHFRP30047 84 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 PSMB3P49720 205 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 PPT1P50897 306 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 C12orf54Q6X4T0 127 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 OR4F17Q8NGA8 305 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 MARC2Q969Z3 335 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 OR4F4Q96R69 305 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 TMEM167BQ9NRX6 74 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 NF1P21359 2839 aa12.87□□□□□ -0.35
SNX1-203ENST00000558040 TMEM213A2RRL7 107 aa12.86□□□□□ -0.35
SNX1-203ENST00000558040 M0QZ24 198 aa12.86□□□□□ -0.35
SNX1-203ENST00000558040 IFNA1P01562 189 aa12.86□□□□□ -0.35
SNX1-203ENST00000558040 UBE2L3P68036 154 aaKnown RBP12.86□□□□□ -0.35
SNX1-203ENST00000558040 OR9G4Q8NGQ1 327 aa12.86□□□□□ -0.35
SNX1-203ENST00000558040 DLX4Q92988 240 aaPredicted RBP12.86□□□□□ -0.35
SNX1-203ENST00000558040 ZNF747Q9BV97 191 aa12.86□□□□□ -0.35
SNX1-203ENST00000558040 ELOVL1Q9BW60 279 aa12.86□□□□□ -0.35
SNX1-203ENST00000558040 SMPXQ9UHP9 88 aa12.86□□□□□ -0.35
SNX1-203ENST00000558040 IGHV3-49A0A0A0MS15 119 aa12.85□□□□□ -0.35
SNX1-203ENST00000558040 PF4P02776 101 aa12.85□□□□□ -0.35
SNX1-203ENST00000558040 GP9P14770 177 aa12.85□□□□□ -0.35
SNX1-203ENST00000558040 GALR1P47211 349 aa12.85□□□□□ -0.35
SNX1-203ENST00000558040 C16orf54Q6UWD8 224 aa12.85□□□□□ -0.35
SNX1-203ENST00000558040 C3orf56Q8N813 242 aa12.85□□□□□ -0.35
SNX1-203ENST00000558040 RHPN1-AS1Q9BWJ2 59 aa12.85□□□□□ -0.35
SNX1-203ENST00000558040 IGHV3OR16-13A0A075B7E8 117 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 IGHV3-74A0A0B4J1X5 117 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 IGHV3-66A0A0C4DH42 116 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 C2orf70A6NJV1 201 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 OVOL1O14753 267 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 APOHP02749 345 aaPredicted RBP12.84□□□□□ -0.35
SNX1-203ENST00000558040 OR10J4P0C629 311 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 PYYP10082 97 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 ZNF503Q96F45 646 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 MANBALQ9NQG1 85 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
SNX1-203ENST00000558040 LINC00862A6NCI5 91 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 HELTA6NFD8 242 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 CHEK1O14757 476 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 HIST1H1EP10412 219 aaKnown RBP12.83□□□□□ -0.36
SNX1-203ENST00000558040 ATF4P18848 351 aaPredicted RBP12.83□□□□□ -0.36
SNX1-203ENST00000558040 CBLN1P23435 193 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.36
SNX1-203ENST00000558040 CCL20P78556 96 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 PMS2P11Q13670 270 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 NDUFA5Q16718 116 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 SHISA2Q6UWI4 295 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 LURAP1LQ8IV03 231 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 FXYD5Q96DB9 178 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 TMPRSS5Q9H3S3 457 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 GNG13Q9P2W3 67 aa12.83□□□□□ -0.36
SNX1-203ENST00000558040 NIPBLQ6KC79 2804 aaeCLIP12.82□□□□□ -0.36
SNX1-203ENST00000558040 CD5P06127 495 aa12.82□□□□□ -0.36
SNX1-203ENST00000558040 FOLR2P14207 255 aa12.82□□□□□ -0.36
SNX1-203ENST00000558040 MEOX2P50222 304 aa12.82□□□□□ -0.36
SNX1-203ENST00000558040 GUK1Q16774 197 aa12.82□□□□□ -0.36
SNX1-203ENST00000558040 SIGLEC15Q6ZMC9 328 aa12.82□□□□□ -0.36
SNX1-203ENST00000558040 SUN5Q8TC36 379 aa12.82□□□□□ -0.36
SNX1-203ENST00000558040 ARL2-SNX15V9GYD0 113 aa12.82□□□□□ -0.36
SNX1-203ENST00000558040 ZNF785A8K8V0 405 aa12.81□□□□□ -0.36
SNX1-203ENST00000558040 MRPS12O15235 138 aaKnown RBP12.81□□□□□ -0.36
SNX1-203ENST00000558040 NBEAP1P0C6P0 100 aa12.81□□□□□ -0.36
SNX1-203ENST00000558040 IGLC2P0DOY2 106 aa12.81□□□□□ -0.36
SNX1-203ENST00000558040 FAM210AQ96ND0 272 aa12.81□□□□□ -0.36
SNX1-203ENST00000558040 A0A087X0K7 114 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 RAB19A4D1S5 217 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 RBFOX3A6NFN3 312 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 CSN3P07498 182 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 BCL2P10415 239 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 PDE6HQ13956 83 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 COMMD7Q86VX2 200 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 DYNLRB2Q8TF09 96 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 BLNKQ8WV28 456 aa12.8□□□□□ -0.36
SNX1-203ENST00000558040 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 H3BQ15 152 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 EDN2P20800 178 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 UBE2G2P60604 165 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
SNX1-203ENST00000558040 HAGHQ16775 308 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 TCF24Q7RTU0 167 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 EIF5A2Q9GZV4 153 aaKnown RBP12.79□□□□□ -0.36
SNX1-203ENST00000558040 ZNF586Q9NXT0 402 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 SIGLEC8Q9NYZ4 499 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
SNX1-203ENST00000558040 LOC102723971A0A1B0GUV8 181 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 PAGE4O60829 102 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 ZNF253O75346 499 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 PEA15Q15121 130 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 TOR2AQ5JU69 321 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 ZNF506Q5JVG8 444 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 CST9LP1Q5W188 147 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 LINC00482Q8N8I6 264 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 TXNDC17Q9BRA2 123 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 NKX6-2Q9C056 277 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms