RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
PCNX4-213ENST00000556907 TECRQ9NZ01 308 aaKnown RBP12.47□□□□□ -0.41
PCNX4-213ENST00000556907 IGHV3-35A0A0C4DH35 117 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 TEX46H3BTG2 121 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 C8orf88P0DMB2 117 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 CBLN1P23435 193 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 TAS2R45P59539 299 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 BEAN1Q3B7T3 259 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 KHDC3LQ587J8 217 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 MIR17HGQ75NE6 70 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 LINC00305Q7Z4B0 112 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 UHRF2Q96PU4 802 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 MED9Q9NWA0 146 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 RABAC1Q9UI14 185 aa12.46□□□□□ -0.41
PCNX4-213ENST00000556907 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 LINC00862A6NCI5 91 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 IGLV1-51P01701 117 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 FOLR2P14207 255 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 S100A7P31151 101 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 BMI1P35226 326 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 MORN5Q5VZ52 161 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 LCN15Q6UWW0 184 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 SHANK2-AS3Q9BTD1 123 aa12.45□□□□□ -0.42
PCNX4-213ENST00000556907 SLC25A39Q9BZJ4 359 aaPredicted RBP12.45□□□□□ -0.42
PCNX4-213ENST00000556907 NBEAL1Q6ZS30 2694 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 CXorf1O96002 111 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 PQLC2Q6ZP29 291 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 DYNLRB2Q8TF09 96 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 SFT2D1Q8WV19 159 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 FAM167A-AS1Q96KT0 104 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 C20orf24Q9BUV8 137 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 SLC25A2Q9BXI2 301 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 HRH4Q9H3N8 390 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 RNF24Q9Y225 148 aa12.44□□□□□ -0.42
PCNX4-213ENST00000556907 CD5P06127 495 aa12.43□□□□□ -0.42
PCNX4-213ENST00000556907 ARL14EPLP0DKL9 152 aa12.43□□□□□ -0.42
PCNX4-213ENST00000556907 FGF8P55075 233 aaPredicted RBP12.43□□□□□ -0.42
PCNX4-213ENST00000556907 TM4SF20Q53R12 229 aa12.43□□□□□ -0.42
PCNX4-213ENST00000556907 METTL26Q96S19 204 aa12.43□□□□□ -0.42
PCNX4-213ENST00000556907 SCRT1Q9BWW7 348 aa12.43□□□□□ -0.42
PCNX4-213ENST00000556907 PFDN2Q9UHV9 154 aa12.43□□□□□ -0.42
PCNX4-213ENST00000556907 HMGB3O15347 200 aaKnown RBP12.42□□□□□ -0.42
PCNX4-213ENST00000556907 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCNX4-213ENST00000556907 GP9P14770 177 aa12.42□□□□□ -0.42
PCNX4-213ENST00000556907 CRYBB3P26998 211 aa12.42□□□□□ -0.42
PCNX4-213ENST00000556907 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
PCNX4-213ENST00000556907 LCN12Q6JVE5 192 aa12.42□□□□□ -0.42
PCNX4-213ENST00000556907 NARS2Q96I59 477 aaKnown RBP12.42□□□□□ -0.42
PCNX4-213ENST00000556907 U3KQE9 123 aa12.42□□□□□ -0.42
PCNX4-213ENST00000556907 NOTCH1P46531 2555 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 TRAV25A0A0B4J276 109 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 IGHV7-4-1A0A0J9YVY3 117 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 A0A1W2PS18 150 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 ZNF98A6NK75 572 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 NPPCP23582 126 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 GCHFRP30047 84 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 PSMB3P49720 205 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 PMS2P11Q13670 270 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 DEFB114Q30KQ6 69 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 ADAMTSL5Q6ZMM2 481 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 STXBP6Q8NFX7 210 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 ZNF503Q96F45 646 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 TMEM231Q9H6L2 316 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 TMEM14CQ9P0S9 112 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 SMPXQ9UHP9 88 aa12.41□□□□□ -0.42
PCNX4-213ENST00000556907 SORL1Q92673 2214 aa12.4□□□□□ -0.42
PCNX4-213ENST00000556907 IGHV3OR16-8A0A075B7F1 116 aa12.4□□□□□ -0.42
PCNX4-213ENST00000556907 TRAV5A0A0B4J249 113 aa12.4□□□□□ -0.42
PCNX4-213ENST00000556907 A0A1B0GV50 99 aa12.4□□□□□ -0.42
PCNX4-213ENST00000556907 OR7C2O60412 319 aa12.4□□□□□ -0.42
PCNX4-213ENST00000556907 PPT1P50897 306 aa12.4□□□□□ -0.42
PCNX4-213ENST00000556907 SUN5Q8TC36 379 aa12.4□□□□□ -0.42
PCNX4-213ENST00000556907 ZNF256Q9Y2P7 627 aaPredicted RBP12.4□□□□□ -0.42
PCNX4-213ENST00000556907 ARL2-SNX15V9GYD0 113 aa12.4□□□□□ -0.42
PCNX4-213ENST00000556907 IFNA1P01562 189 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 UBE2L3P68036 154 aaKnown RBP12.39□□□□□ -0.43
PCNX4-213ENST00000556907 CCL20P78556 96 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 C1orf194Q5T5A4 169 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 COMMD7Q86VX2 200 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 GPR82Q96P67 336 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 PAXXQ9BUH6 204 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 OR51M1Q9H341 326 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 MANBALQ9NQG1 85 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 TMEM167BQ9NRX6 74 aa12.39□□□□□ -0.43
PCNX4-213ENST00000556907 RAB19A4D1S5 217 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 CHEK1O14757 476 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 MRPS12O15235 138 aaKnown RBP12.38□□□□□ -0.43
PCNX4-213ENST00000556907 ZNF207O43670 478 aaKnown RBP12.38□□□□□ -0.43
PCNX4-213ENST00000556907 BUB3O43684 328 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 KRTAP10-11P60412 298 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 CD300EQ496F6 205 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-213ENST00000556907 LEMD1Q68G75 181 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 BPIFA4PQ86YQ2 179 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 FXYD5Q96DB9 178 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 FAM210AQ96ND0 272 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 RHPN1-AS1Q9BWJ2 59 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 TMPRSS5Q9H3S3 457 aa12.38□□□□□ -0.43
PCNX4-213ENST00000556907 MLXQ9UH92 298 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms