RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 IFI27L2Q9H2X8 130 aa11.05□□□□□ -0.64
SHMT2-226ENST00000556825 OOSP1A8MZH6 123 aa11.05□□□□□ -0.64
SHMT2-226ENST00000556825 H3BVH4 76 aa11.05□□□□□ -0.64
SHMT2-226ENST00000556825 TNFRSF6BO95407 300 aa11.05□□□□□ -0.64
SHMT2-226ENST00000556825 IGKCP01834 107 aa11.05□□□□□ -0.64
SHMT2-226ENST00000556825 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
SHMT2-226ENST00000556825 EPDR1Q9UM22 224 aa11.05□□□□□ -0.64
SHMT2-226ENST00000556825 MSRB2Q9Y3D2 182 aa11.05□□□□□ -0.64
SHMT2-226ENST00000556825 EFNA2O43921 213 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 OR2H2O95918 312 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 MKXQ8IYA7 352 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 MLST8Q9BVC4 326 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 DNAH14Q0VDD8 3507 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 LOC389332A0A1B0GUA5 103 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 NPYP01303 97 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 DEFB110Q30KQ9 67 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 C3orf22Q8N5N4 141 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 OR13H1Q8NG92 308 aa11.04□□□□□ -0.64
SHMT2-226ENST00000556825 LINC01549A6NIU2 74 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 SYNGR3O43761 229 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 TCL1BO95988 128 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 RPS21P63220 83 aaKnown RBP11.03□□□□□ -0.64
SHMT2-226ENST00000556825 UBE2L3P68036 154 aaKnown RBP11.03□□□□□ -0.64
SHMT2-226ENST00000556825 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 C10orf126Q8N4M7 172 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 FAM57AQ8TBR7 257 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 TANC2Q9HCD6 1990 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 A0A1W2PQU0 124 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 CRYGBP07316 175 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 RIGQ13278 110 aa11.03□□□□□ -0.64
SHMT2-226ENST00000556825 SLC25A48Q6ZT89 311 aaKnown RBP11.03□□□□□ -0.64
SHMT2-226ENST00000556825 BRWD1Q9NSI6 2320 aa11.02□□□□□ -0.65
SHMT2-226ENST00000556825 CECR9P0C854 216 aa11.02□□□□□ -0.65
SHMT2-226ENST00000556825 FXYD7P58549 80 aa11.02□□□□□ -0.65
SHMT2-226ENST00000556825 HSPE1P61604 102 aaKnown RBP11.02□□□□□ -0.65
SHMT2-226ENST00000556825 FOXC1Q12948 553 aa11.02□□□□□ -0.65
SHMT2-226ENST00000556825 ASCL5Q7RTU5 278 aa11.02□□□□□ -0.65
SHMT2-226ENST00000556825 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.65
SHMT2-226ENST00000556825 DUX3Q96PT4 197 aa11.02□□□□□ -0.65
SHMT2-226ENST00000556825 TRAV8-4A0A0B4J246 113 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 OVOL3O00110 214 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 DUTP33316 252 aaKnown RBP11.01□□□□□ -0.65
SHMT2-226ENST00000556825 ZC2HC1BQ5TFG8 222 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 UBALD1Q8TB05 177 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 ITLN1Q8WWA0 313 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 FAM167A-AS1Q96KT0 104 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 TRGV9Q99603 122 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 TRAV2A0A0B4J234 112 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 NPIPB3Q92617 1050 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 U3KQK5 164 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 SZT2Q5T011 3432 aa11.01□□□□□ -0.65
SHMT2-226ENST00000556825 DPM2O94777 84 aa11□□□□□ -0.65
SHMT2-226ENST00000556825 ORM1P02763 201 aa11□□□□□ -0.65
SHMT2-226ENST00000556825 FAM27BQ5VT28 67 aa11□□□□□ -0.65
SHMT2-226ENST00000556825 UQCRQO14949 82 aa11□□□□□ -0.65
SHMT2-226ENST00000556825 MMABQ96EY8 250 aaPredicted RBP11□□□□□ -0.65
SHMT2-226ENST00000556825 LINC00526Q96FQ7 95 aa11□□□□□ -0.65
SHMT2-226ENST00000556825 FGF23Q9GZV9 251 aaPredicted RBP11□□□□□ -0.65
SHMT2-226ENST00000556825 ZNF576Q9H609 170 aa11□□□□□ -0.65
SHMT2-226ENST00000556825 A0A1W2PNR3 127 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 SLC25A20O43772 301 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 CD7P09564 240 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 SFTA2Q6UW10 78 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 OR11H6Q8NGC7 330 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 CFHR4Q92496 578 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 FAM173AQ9BQD7 235 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 COL5A1P20908 1838 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-226ENST00000556825 A0A0J9YW62 118 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 UBE2D1P51668 147 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 GNG5P63218 68 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 TWIST1Q15672 202 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 WFDC3Q8IUB2 231 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 TDHQ8IZJ6 230 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 Q8N1Y9 231 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 CCL4L1Q8NHW4 92 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 CALYQ9NYX4 217 aa10.99□□□□□ -0.65
SHMT2-226ENST00000556825 RTTNQ86VV8 2226 aa10.98□□□□□ -0.65
SHMT2-226ENST00000556825 TRBV7-7A0A0K0K1E9 115 aa10.98□□□□□ -0.65
SHMT2-226ENST00000556825 PRSS38A1L453 326 aa10.98□□□□□ -0.65
SHMT2-226ENST00000556825 H0Y8X5 98 aa10.98□□□□□ -0.65
SHMT2-226ENST00000556825 TEX36Q5VZQ5 186 aa10.98□□□□□ -0.65
SHMT2-226ENST00000556825 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
SHMT2-226ENST00000556825 TRGV8A0A0C4DH27 118 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 D6R8Y8 96 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 ARMS2P0C7Q2 107 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 MYCNOSP40205 109 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 MRPS21P82921 87 aaKnown RBP10.97□□□□□ -0.65
SHMT2-226ENST00000556825 ZNF497Q6ZNH5 498 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 TRPT1Q86TN4 253 aaKnown RBP10.97□□□□□ -0.65
SHMT2-226ENST00000556825 C11orf53Q8IXP5 236 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 SPANXDQ9BXN6 97 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 MBD3L4A6NDZ8 208 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-226ENST00000556825 MBD3L3A6NE82 208 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-226ENST00000556825 MBD3L5A6NJ08 208 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-226ENST00000556825 TM4SF5O14894 197 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 PRSS1P07477 247 aa10.97□□□□□ -0.65
SHMT2-226ENST00000556825 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms