RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PFDN2Q9UHV9 154 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 NACAE9PAV3 2078 aa8.4□□□□□ -1.06
ACTN1-221ENST00000556571 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.07
ACTN1-221ENST00000556571 NBDYA0A0U1RRE5 68 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 PITX3O75364 302 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 UPK1BO75841 260 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 IAPPP10997 89 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 DEFB1P60022 68 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 PSG9Q00887 426 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 RRN3P1Q2M238 152 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 C1orf158Q8N1D5 194 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 OR4B1Q8NGF8 309 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 ENKURQ8TC29 256 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 NPIPB3Q92617 1050 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 ACY3Q96HD9 319 aa8.39□□□□□ -1.07
ACTN1-221ENST00000556571 SYNGR2O43760 224 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 ADAP1O75689 374 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 H2AFB2P0C5Z0 115 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 PSG1P11464 419 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 PSMB3P49720 205 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 ASAH1Q13510 395 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 OR51G1Q8NGK1 321 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 MITD1Q8WV92 249 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 MAGT1Q9H0U3 335 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 SLC35B3Q9H1N7 401 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 SCRT2Q9NQ03 307 aa8.38□□□□□ -1.07
ACTN1-221ENST00000556571 PAX9P55771 341 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 DEFA1P59665 94 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 DEFA3P59666 94 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 IAH1Q2TAA2 248 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-221ENST00000556571 OR8G2PQ6IF36 304 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 EBLN2Q6P2I7 272 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 ZNRF2Q8NHG8 242 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 RNF125Q96EQ8 232 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 SLC35E1Q96K37 410 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 GSKIPQ9P0R6 139 aa8.37□□□□□ -1.07
ACTN1-221ENST00000556571 ZFP92A6NM28 416 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 FAM25EA8MYX2 175 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 SOCS3O14543 225 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 FABP1P07148 127 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 GPX4P36969 197 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-221ENST00000556571 SPANXN5Q5MJ07 72 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 C1orf194Q5T5A4 169 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 FAM78BQ5VT40 261 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 ZNF431Q8TF32 576 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-221ENST00000556571 TMEM170AQ8WVE7 144 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 TMEM208Q9BTX3 173 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 PBDC1Q9BVG4 233 aa8.36□□□□□ -1.07
ACTN1-221ENST00000556571 STRAPQ9Y3F4 350 aaKnown RBP8.36□□□□□ -1.07
ACTN1-221ENST00000556571 DMBT1Q9UGM3 2413 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-221ENST00000556571 A0A0J9YX75 114 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 C5orf51A6NDU8 294 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 LYRM9A8MSI8 78 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 ISLRO14498 428 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 SSSCA1O60232 199 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 CCL18P55774 89 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 POLR2GP62487 172 aaKnown RBP eCLIP8.35□□□□□ -1.07
ACTN1-221ENST00000556571 SAMD13Q5VXD3 122 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 IGF2BP2-AS1Q96M15 143 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 SEC22CQ9BRL7 303 aa8.35□□□□□ -1.07
ACTN1-221ENST00000556571 GPN1Q9HCN4 374 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-221ENST00000556571 F6UB75 175 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 H3BP45 60 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 NUDT3O95989 172 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 ID3Q02535 119 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 GAMTQ14353 236 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 SPATA12Q7Z6I5 190 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 C12orf45Q8N5I9 185 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-221ENST00000556571 OR4D5Q8NGN0 318 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 RPRMQ9NS64 109 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 PSENENQ9NZ42 101 aa8.34□□□□□ -1.07
ACTN1-221ENST00000556571 F5H768 121 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 L7N2F9 121 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 CCSO14618 274 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 DEFB130BP0DP73 79 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 DEFB130AP0DP74 79 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 B2MP61769 119 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 VAMP2P63027 116 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 OR8I2Q8N0Y5 310 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 ZBTB8BQ8NAP8 495 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-221ENST00000556571 DOK5Q9P104 306 aa8.33□□□□□ -1.08
ACTN1-221ENST00000556571 SMCO3A2RU48 225 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 A8MTW9 85 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 SNRPGP15A8MWD9 76 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 IL5P05113 134 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 TSPOP30536 169 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 MEOX2P50222 304 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 ZNF90Q03938 601 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 AKR1C1Q04828 323 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 AMTNQ6UX39 209 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 PPP1R14BQ96C90 147 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 SMIM8Q96KF7 97 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 LINC00588Q9Y4M8 146 aa8.32□□□□□ -1.08
ACTN1-221ENST00000556571 ZNF705GA8MUZ8 300 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-221ENST00000556571 PRAF2O60831 178 aa8.31□□□□□ -1.08
ACTN1-221ENST00000556571 INSP01308 110 aa8.31□□□□□ -1.08
ACTN1-221ENST00000556571 ATP5G1P05496 136 aa8.31□□□□□ -1.08
ACTN1-221ENST00000556571 PVALBP20472 110 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms